Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32090
(556 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 107 8e-25
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 81 1e-16
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 36 0.003
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 34 0.012
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 28 0.80
SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.4
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 1.9
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 2.5
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 26 3.2
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 25 7.5
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.9
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 25 9.9
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 25 9.9
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 107 bits (258), Expect = 8e-25
Identities = 50/90 (55%), Positives = 64/90 (71%)
Frame = +2
Query: 245 PXHIKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKI 424
P H +N+ ALSPTM +G+I +++KK GDK+ GD+LCEIETDK + FE +EGYL KI
Sbjct: 51 PAHTVINMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKI 110
Query: 425 LITDGTKGVPVGKLLCIIVGDQNDVAVFKD 514
LI GTK VPVGK L + V ++ DVA D
Sbjct: 111 LIETGTKDVPVGKPLAVTVENEGDVAAMAD 140
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 81.0 bits (191), Expect = 1e-16
Identities = 38/87 (43%), Positives = 54/87 (62%)
Frame = +2
Query: 266 LAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTK 445
+ ALSPTME G+I W KEGD GD+L E+ETDK TM E + G L K+LI G+
Sbjct: 40 MPALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKGS- 98
Query: 446 GVPVGKLLCIIVGDQNDVAVFKDLKDD 526
+PVGK + I+ ++++ + KD+
Sbjct: 99 NIPVGKNIAIVADAEDNLKDLELPKDE 125
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 36.3 bits (80), Expect = 0.003
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +2
Query: 284 TMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDG 439
++ G++ W K+ G+ +++ + + +ETDK+ P+ G L + L+ +G
Sbjct: 53 SITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKEG 104
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 34.3 bits (75), Expect = 0.012
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 293 SGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDG 439
SG+IV KEG K+ +GD++ + K+ + P G L + + G
Sbjct: 1122 SGTIVEIRVKEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQG 1170
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 28.3 bits (60), Expect = 0.80
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 188 QAVLSVPQWTVQMRYYSSLPXHIKVNLAALSPTMESGSIVSWEKKEGDKLSE 343
Q +++ P W YY +P H + LA T+ S WE++ G++ ++
Sbjct: 263 QILMNDPYWNRGF-YYDGVPPHTGMKLAREVATISYRSGPEWEQRFGNRRAD 313
>SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 242 DSNNTSSEQSIVVQIELPGYCVYSNNLFVTFLFASSVLMHLVIFDRIAFLRP 87
++ N +S++ + Q +P Y +NN T L A + ++ FD I+F P
Sbjct: 123 ENGNETSDELVFFQHSIPAYVQLTNN-HGTILCALILCKGMLHFDSISFQSP 173
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.1 bits (57), Expect = 1.9
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +1
Query: 94 KKAIRSNITRCISTELAK---RKVTNKLLE--YTQ*PGSSICTTMDCSDEVLFESTXTYK 258
K A+R+NI RC+ T + + +T+ LE Y S +D S ++L YK
Sbjct: 3460 KSAVRTNIERCVQTSIESKYYKNLTDYSLENIYIIQENKSPLLIIDPSSQILDILPSLYK 3519
Query: 259 GXPCS--SFAN 285
G SF+N
Sbjct: 3520 GKASDLISFSN 3530
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 284 TMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTKGVPVGK 463
T G +V + + G+ + G+ E+E K+ M E+G +V+++ G + G
Sbjct: 715 TPSPGKLVRFLVETGEHIKAGEAYAEVEVMKMIMPLVATEDG-VVQLIKQPGA-SLDAGD 772
Query: 464 LLCIIVGD 487
+L I+ D
Sbjct: 773 ILGILTLD 780
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 381 LWALRHLKKVTWSKY*LRTVQRECL 455
LW L + K+VTW Y + R CL
Sbjct: 261 LWCLLNDKRVTWKAYAGHWIARVCL 285
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 76 FDSVTQLFAT-LSIFFTKTIPS 14
F+S T + +T L +FFT+T PS
Sbjct: 820 FESTTLVLSTGLDVFFTRTAPS 841
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 293 SPWLAKELQGXPLYVMVDSNNTSSEQSIVVQIEL 192
SP + + +Y VD+NNT+S Q +V+ + L
Sbjct: 23 SPGIPSNDKDLAIYPPVDANNTTS-QDVVIDVVL 55
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 9.9
Identities = 6/22 (27%), Positives = 16/22 (72%)
Frame = -1
Query: 430 NQYFDQVTFFRCLKAHSYFVSF 365
N++FD++ + ++ HS++ +F
Sbjct: 507 NKWFDEMVYIYAVRLHSFYYTF 528
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 24.6 bits (51), Expect = 9.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 329 DKLSEGD--LLCEIETDKVTMGFETPEEGYLVKILITDGTKGV 451
D+L G L + + DK + +ETP EGY +L+ K V
Sbjct: 798 DQLQPGKVALFVDWQIDKFSFFYETPAEGY--NLLVEANEKSV 838
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,312,181
Number of Sequences: 5004
Number of extensions: 48070
Number of successful extensions: 124
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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