Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32090
(556 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 107 4e-24
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 106 1e-23
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 103 7e-23
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 91 5e-19
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 66 2e-11
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 62 2e-10
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 62 3e-10
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 46 2e-05
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 46 2e-05
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 33 0.15
10_08_0381 + 17398972-17399014,17400823-17400981,17401066-174012... 30 1.4
10_03_0040 - 7307108-7307564,7307611-7307915 29 1.9
12_02_1157 + 26565040-26565081,26565189-26565262,26565343-265654... 27 7.6
04_01_0159 - 1824343-1824405,1824485-1824595,1825282-1825448,182... 27 7.6
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 107 bits (258), Expect = 4e-24
Identities = 46/95 (48%), Positives = 67/95 (70%)
Frame = +2
Query: 236 SSLPXHIKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYL 415
+ LP H ++ + +LSPTM G+I W KKEGDK+S G++LCE+ETDK T+ E EEGYL
Sbjct: 113 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 172
Query: 416 VKILITDGTKGVPVGKLLCIIVGDQNDVAVFKDLK 520
KI+ DG+K + VG+++ + V ++ D+ FKD K
Sbjct: 173 AKIIHGDGSKEIKVGEIIAVTVEEEGDIKKFKDYK 207
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 106 bits (255), Expect = 1e-23
Identities = 46/95 (48%), Positives = 66/95 (69%)
Frame = +2
Query: 236 SSLPXHIKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYL 415
+ LP H ++ + +LSPTM G+I W KKEGDK+S G++LCE+ETDK T+ E EEGYL
Sbjct: 1616 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 1675
Query: 416 VKILITDGTKGVPVGKLLCIIVGDQNDVAVFKDLK 520
KI+ DG K + VG+++ + V ++ D+ FKD K
Sbjct: 1676 AKIIHGDGAKEIKVGEIIAVTVEEEGDLEKFKDYK 1710
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 103 bits (248), Expect = 7e-23
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = +2
Query: 188 QAVLSVPQWTVQMRYYSSLPXHIKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIE 367
QA+ +V + +R + P H+ V + ALSPTM G+I W K+EG+K+ GD++CEIE
Sbjct: 130 QAMGTVSACSSWIRPTARFPPHLVVGMPALSPTMNQGNIAKWRKQEGEKIEVGDVICEIE 189
Query: 368 TDKVTMGFETPEEGYLVKILITDGTKGVPVGKLLCIIVGDQNDV 499
TDK T+ FE+ EEGYL KIL +G+K V VG+ + + V D D+
Sbjct: 190 TDKATLEFESLEEGYLAKILAPEGSKDVQVGQPIAVTVEDLEDI 233
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 91.1 bits (216), Expect = 5e-19
Identities = 43/95 (45%), Positives = 61/95 (64%)
Frame = +2
Query: 236 SSLPXHIKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYL 415
+ L HI +L +S G+I W KKEGDK+S G++LCE+ETDK T+ E EEGYL
Sbjct: 74 NGLRVHIHCSLFIISG---QGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 130
Query: 416 VKILITDGTKGVPVGKLLCIIVGDQNDVAVFKDLK 520
KI+ DG K + VG+++ + V ++ D+ FKD K
Sbjct: 131 AKIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYK 165
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/81 (35%), Positives = 50/81 (61%)
Frame = +2
Query: 257 KVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITD 436
++ + ALS TM G IVSW EGD+L++GD + +E+DK M ET +G+L +L+
Sbjct: 51 EIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPA 110
Query: 437 GTKGVPVGKLLCIIVGDQNDV 499
G + PVG + ++ ++++
Sbjct: 111 G-ESAPVGSAIALLAESEDEI 130
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +2
Query: 257 KVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITD 436
++ + ALS TM G IVSW EGD++++GD + +E+DK M ET +G + +L+
Sbjct: 48 EIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPA 107
Query: 437 GTKGVPVGKLLCIIVGDQNDV 499
G + PVG + ++ ++D+
Sbjct: 108 G-ESAPVGAPIALLAESEDDL 127
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/83 (36%), Positives = 50/83 (60%)
Frame = +2
Query: 257 KVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITD 436
++ + ALS TM G IVSW EGD++++GD + +E+DK M ET +G + +L+
Sbjct: 43 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 102
Query: 437 GTKGVPVGKLLCIIVGDQNDVAV 505
G + PVG + ++ + +VAV
Sbjct: 103 G-ESAPVGAPIALLAESEEEVAV 124
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +2
Query: 275 LSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTKGVP 454
+ ++ G++ ++ KK GD++ + + +IETDKVT+ +PE G + K + ++G P
Sbjct: 81 MGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASEGDTVTP 140
Query: 455 VGKLLCI 475
K+ I
Sbjct: 141 GTKVAII 147
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Frame = +2
Query: 275 LSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDG---TK 445
+ ++ G++ ++ KK GD++ + + +IETDKVTM +PE G + K + ++G T
Sbjct: 53 MGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEKFVASEGGIVTP 112
Query: 446 GVPV 457
GV V
Sbjct: 113 GVKV 116
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 254 IKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKI 424
+ V LA + ++ W EGD++ E LCE+++DK T+ + +G + +I
Sbjct: 36 VDVPLAQTGEGIAECELLRWFVTEGDQVDEFQRLCEVQSDKATIEITSRFKGKVHQI 92
>10_08_0381 +
17398972-17399014,17400823-17400981,17401066-17401241,
17401565-17401842,17401938-17402073,17402183-17402294,
17402421-17402515
Length = 332
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +2
Query: 260 VNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDG 439
+N +S + G+ + +K+ LS C+ D V +G TPE ++ + +DG
Sbjct: 220 LNTEFISTVQQRGAAIIKARKQSSALSAASSACDHIRDWV-LG--TPEGTFVSMGVYSDG 276
Query: 440 TKGVPVG 460
+ GVP G
Sbjct: 277 SYGVPAG 283
>10_03_0040 - 7307108-7307564,7307611-7307915
Length = 253
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 203 VPQWTVQMRYYSSLPXHIKVNLAALSPTMESG 298
+PQW + + YSS P ++++ L +L+ + SG
Sbjct: 193 LPQWRRRQQDYSSTPSNLQLRLGSLTMVISSG 224
>12_02_1157 +
26565040-26565081,26565189-26565262,26565343-26565460,
26565547-26565617,26565704-26565869,26565946-26566145,
26566669-26566880,26567404-26567522,26567952-26568053,
26568144-26568253,26568340-26568427,26568574-26568606,
26568635-26568834,26568916-26569120
Length = 579
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 314 EKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTKGVPVGK 463
+++ DK + L D+ + GF PE+ + K + T T+ PV K
Sbjct: 19 KRRASDKPANDQSLHSAAFDRASNGFRNPEQSKISKYISTRVTEVFPVKK 68
>04_01_0159 -
1824343-1824405,1824485-1824595,1825282-1825448,
1825853-1826029,1826404-1826656
Length = 256
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 269 AALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDK----VTMGFE 394
A P M +GSIV + + D+LC+IET K V++GF+
Sbjct: 89 ARYQPVMFNGSIVYCRTPSEVEKATRDILCKIETMKASGQVSLGFD 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,032,067
Number of Sequences: 37544
Number of extensions: 276074
Number of successful extensions: 678
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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