Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32090
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...   162   1e-40
AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...    51   6e-07
Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical pr...    36   0.020
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    32   0.24 
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    32   0.24 
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      32   0.24 
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    32   0.32 
U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical pr...    31   0.74 
AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb...    28   3.9  
Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U97003-7|AAB52274.1|  357|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z82265-5|CAB05175.1|  334|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AC024201-2|AAK82924.1|  556|Caenorhabditis elegans Abnormal cell...    27   9.1  

>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score =  162 bits (394), Expect = 1e-40
 Identities = 77/104 (74%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
 Frame = +2

Query: 221 QMRYYSS--LPXHIKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFE 394
           Q+R YSS  LP H +V L ALSPTME G++VSW+KKEGD+LSEGDLLCEIETDK TMGFE
Sbjct: 65  QVRLYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFE 124

Query: 395 TPEEGYLVKILITDGTKGVPVGKLLCIIVGDQNDVAVFKDLKDD 526
           TPEEGYL KILI +G+K VP+GKLLCIIV ++ DVA FKD KDD
Sbjct: 125 TPEEGYLAKILIQEGSKDVPIGKLLCIIVDNEADVAAFKDFKDD 168


>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score = 50.8 bits (116), Expect = 6e-07
 Identities = 26/71 (36%), Positives = 41/71 (57%)
 Frame = +2

Query: 254 IKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILIT 433
           I V   A + ++  G I  W K++GD ++E +L+ EIETDK ++    P+ G +V+ L+ 
Sbjct: 64  ITVEGPAFAESISEGDI-RWLKQKGDHVNEDELVAEIETDKTSVEVPAPQAGTIVEFLVE 122

Query: 434 DGTKGVPVGKL 466
           DG K     KL
Sbjct: 123 DGAKVTAKQKL 133


>Z37093-3|CAA85465.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK669.4 protein.
          Length = 448

 Score = 35.9 bits (79), Expect = 0.020
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = +2

Query: 254 IKVNLAALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKI 424
           ++  L+ +   +    +  W  KEGD +S+ D +CE+++DK  +      +G + K+
Sbjct: 31  VQFKLSDIGEGIAEVQVKEWYVKEGDTISQFDKVCEVQSDKAAVTISCRYDGIVKKL 87


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +2

Query: 329 DKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTKGVPVGKLLCIIVGDQNDVAVF 508
           D+L+   +L EIET+K     E  E+G LV +    G   + V K+  +     N +   
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384

Query: 509 KDL 517
            +L
Sbjct: 385 TNL 387


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +2

Query: 329 DKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTKGVPVGKLLCIIVGDQNDVAVF 508
           D+L+   +L EIET+K     E  E+G LV +    G   + V K+  +     N +   
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384

Query: 509 KDL 517
            +L
Sbjct: 385 TNL 387


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +2

Query: 329 DKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTKGVPVGKLLCIIVGDQNDVAVF 508
           D+L+   +L EIET+K     E  E+G LV +    G   + V K+  +     N +   
Sbjct: 325 DELTTVTMLTEIETEKNLSEIEVTEDGQLVAVSSQSGVLSIFVTKMPTLAASYNNSICYL 384

Query: 509 KDL 517
            +L
Sbjct: 385 TNL 387


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 18/68 (26%), Positives = 37/68 (54%)
 Frame = +2

Query: 293 SGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTKGVPVGKLLC 472
           +G ++ W+K++GD L+ GD+    E+ K+    E  +    ++ ++ +G    P G +L 
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVEVAKAPGRLQRVVNEGDPIHP-GSVLA 752

Query: 473 IIVGDQND 496
            +V DQ +
Sbjct: 753 KLV-DQTE 759


>U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical
           protein T13C5.2 protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 538 YRSSVIFQIFEYRNIILISNNNAQ*FPDRHSLCTVRN 428
           +R++V   I E++N  +ISN+N     D HS C   N
Sbjct: 143 FRTAVFRWIIEWKNAFIISNDNLPRVVDHHSHCRRSN 179


>AF025469-6|AAR12979.1|  813|Caenorhabditis elegans Hypothetical
           protein W09B6.1b protein.
          Length = 813

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 293 SGSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFE 394
           +G ++ W+K++GD L+ GD+    E+ K+    E
Sbjct: 694 TGKLLQWKKEDGDWLNVGDVYATAESMKMVFQVE 727


>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical protein
            D2023.2 protein.
          Length = 1175

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 296  GSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTK 445
            G ++  + KEGDK+++   L  +   K+ M  ++P  G +  I    GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163


>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
            carboxylase protein.
          Length = 1175

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 296  GSIVSWEKKEGDKLSEGDLLCEIETDKVTMGFETPEEGYLVKILITDGTK 445
            G ++  + KEGDK+++   L  +   K+ M  ++P  G +  I    GTK
Sbjct: 1114 GDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGTK 1163


>Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical
           protein F14F3.2 protein.
          Length = 670

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 321 RKGTNLVKAIFCARLKLTK*LWALRHLKKVTWSKY*LRTV 440
           +KGT +    FC    L   +  LRHL+K  W +  +R V
Sbjct: 32  KKGTVICSECFCFHSYLGPSVSYLRHLRKSAWDEEHIRLV 71


>U97003-7|AAB52274.1|  357|Caenorhabditis elegans Hypothetical
           protein F47C10.4 protein.
          Length = 357

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 481 NNNAQ*FPDRHSLCTVRNQYFDQVTFFRCLKAHSYFVSF-NLAQKI 347
           +N +  F +  SLCTV N+Y++ V +   +    + V + NL   I
Sbjct: 311 HNGSSRFTELLSLCTVTNKYYEDVQYLYWIFQFHFHVKYKNLVSVI 356


>Z82265-5|CAB05175.1|  334|Caenorhabditis elegans Hypothetical
           protein F02H6.7 protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 241 TRIIPHLNSPLWYR*NCLVTVYI 173
           T  IP+L +P + + NC+ TVY+
Sbjct: 224 TNRIPYLKTPAFDKGNCIATVYL 246


>AC024201-2|AAK82924.1|  556|Caenorhabditis elegans Abnormal cell
           lineage protein 17,isoform b protein.
          Length = 556

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 159 RNFPFCQFCTNAPRNIRPYSFLKT 88
           +NF FC  C++AP  ++P   + T
Sbjct: 503 KNFIFCGMCSSAPVKVKPNRAINT 526


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,674,215
Number of Sequences: 27780
Number of extensions: 264106
Number of successful extensions: 762
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)