Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32090
(556 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 3.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 6.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 6.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 6.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 6.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.4
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 335 VCPLPFFPSLQLNHSPWLAKELQGXPLYVMVDSNNTSSE 219
VC P ++ P L + LQ PLY D+N+ E
Sbjct: 604 VCSSPRSEDKEVEDMPVLKRVLQAPPLY---DTNSLMDE 639
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 114
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 347
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LVKNIDNVANNCVTESNLKRWS*ESYTVEYYEVH 128
++ N ++++NN +N ++ +Y YY ++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNIN 347
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.0 bits (42), Expect = 8.4
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -3
Query: 209 VVQIELPGYCVYSNNLFVTFLFAS 138
VV ++P YC++ +N+ + F S
Sbjct: 596 VVGKKMPRYCLFGHNVTLANKFES 619
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,102
Number of Sequences: 438
Number of extensions: 3392
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -