Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32086
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118920-1|AAM50780.1|  320|Drosophila melanogaster LD23608p pro...   149   3e-36
AE013599-3740|AAF47106.2|  331|Drosophila melanogaster CG2827-PA...   149   3e-36

>AY118920-1|AAM50780.1|  320|Drosophila melanogaster LD23608p
           protein.
          Length = 320

 Score =  149 bits (362), Expect = 3e-36
 Identities = 78/131 (59%), Positives = 87/131 (66%)
 Frame = -2

Query: 653 NIQRRLMRARKTPE*FP*QKIYNYYKKFGYKTQVMGASFRNTGEIRELAGCDLLTISPKL 474
           N   +   A K P       IYNYYKKFGYKT VMGASFRN GEI+ LAGCDLLTISP L
Sbjct: 189 NTDTKKFEALKDPGVISVTNIYNYYKKFGYKTLVMGASFRNVGEIKALAGCDLLTISPAL 248

Query: 473 LQELASSXXXXXXXXXXXXXXLNDIEKISLTEPEFRWHLNEDQMATDKLSDGIRRFAADT 294
           L+EL +               L DIEKI++ E  FRW LNED MATDKLS+GIR+FA DT
Sbjct: 249 LKELENETESVVTYLSVSNAKLQDIEKITVDESRFRWLLNEDAMATDKLSEGIRKFAVDT 308

Query: 293 RKLESLIKTLL 261
            KLE+LIKT L
Sbjct: 309 VKLENLIKTYL 319



 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 24/34 (70%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
 Frame = -1

Query: 696 LISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVT 598
           LISPFVGRILDWYV +T  K +E  +DPGV+SVT
Sbjct: 174 LISPFVGRILDWYVANTDTKKFEALKDPGVISVT 207


>AE013599-3740|AAF47106.2|  331|Drosophila melanogaster CG2827-PA
           protein.
          Length = 331

 Score =  149 bits (362), Expect = 3e-36
 Identities = 78/131 (59%), Positives = 87/131 (66%)
 Frame = -2

Query: 653 NIQRRLMRARKTPE*FP*QKIYNYYKKFGYKTQVMGASFRNTGEIRELAGCDLLTISPKL 474
           N   +   A K P       IYNYYKKFGYKT VMGASFRN GEI+ LAGCDLLTISP L
Sbjct: 200 NTDTKKFEALKDPGVISVTNIYNYYKKFGYKTLVMGASFRNVGEIKALAGCDLLTISPAL 259

Query: 473 LQELASSXXXXXXXXXXXXXXLNDIEKISLTEPEFRWHLNEDQMATDKLSDGIRRFAADT 294
           L+EL +               L DIEKI++ E  FRW LNED MATDKLS+GIR+FA DT
Sbjct: 260 LKELENETESVVTYLSVSNAKLQDIEKITVDESRFRWLLNEDAMATDKLSEGIRKFAVDT 319

Query: 293 RKLESLIKTLL 261
            KLE+LIKT L
Sbjct: 320 VKLENLIKTYL 330



 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 24/34 (70%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
 Frame = -1

Query: 696 LISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVT 598
           LISPFVGRILDWYV +T  K +E  +DPGV+SVT
Sbjct: 185 LISPFVGRILDWYVANTDTKKFEALKDPGVISVT 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,817,707
Number of Sequences: 53049
Number of extensions: 503503
Number of successful extensions: 1145
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)