Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32080
(525 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026... 127 5e-30
06_03_0975 - 26471438-26472109,26472189-26472284,26472372-264724... 126 8e-30
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 113 8e-26
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010 57 1e-08
06_03_0085 + 16431503-16431568,16431981-16432152,16432402-164324... 55 3e-08
04_01_0035 - 433848-434372,434905-435381 55 3e-08
06_03_0086 + 16458881-16458952,16461795-16461966,16462621-164628... 54 9e-08
04_01_0038 + 446314-446787,446829-447350 52 3e-07
04_01_0037 + 444239-444667,444817-444825 52 4e-07
04_01_0036 + 436592-437572 50 1e-06
02_01_0012 - 80014-80104,80190-80308,80480-80524,80726-80911,810... 44 6e-05
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 38 0.007
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 36 0.015
04_01_0033 + 391565-391974,393484-393520,394959-395483 36 0.020
02_05_0814 - 31970558-31971126,31971242-31971413 33 0.19
09_02_0252 - 6315834-6315959,6316074-6317018 31 0.43
09_02_0082 - 4060018-4061604 31 0.43
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 31 0.57
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480... 31 0.75
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 31 0.75
02_04_0129 + 20020388-20021215 31 0.75
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 30 1.3
09_06_0081 + 20745627-20748144,20748211-20748308 29 1.7
01_07_0311 + 42667114-42667132,42667336-42667367,42667449-426678... 29 1.7
10_01_0320 + 3506183-3507109 29 2.3
02_01_0575 - 4264136-4264200,4264589-4264652,4264760-4264879,426... 29 2.3
07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331 29 3.0
03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160 29 3.0
12_02_0944 - 24666114-24666200,24666287-24666352,24666450-246665... 28 4.0
06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983... 28 4.0
04_04_1125 + 31085106-31085714 28 4.0
08_01_0637 + 5537421-5539547 28 5.3
06_01_0138 - 1051408-1051625,1052790-1052889,1053724-1054085,105... 28 5.3
03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874... 28 5.3
01_01_0218 + 1856104-1856700,1856814-1857452 28 5.3
09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193 27 7.0
05_07_0268 + 28830373-28830435,28830632-28830736,28831055-28831975 27 7.0
05_05_0091 + 22319411-22320901 27 7.0
04_04_0845 - 28646547-28646637,28646724-28646854,28647832-286479... 27 7.0
04_04_0263 + 24030132-24030539,24031575-24031586,24032023-240322... 27 7.0
03_01_0154 - 1223879-1224274,1224391-1224585 27 7.0
03_01_0138 - 1089063-1089266,1089590-1089671,1089937-1090390,109... 27 7.0
01_01_0148 - 1337494-1338057 27 7.0
01_01_0070 - 542603-542686,542803-543441 27 7.0
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 27 9.2
10_06_0169 + 11420115-11420163,11420922-11421041,11421938-114220... 27 9.2
08_02_0805 + 21400345-21400701,21400797-21400975,21401223-214012... 27 9.2
07_03_1346 + 25927043-25927333,25927867-25927929,25928005-259280... 27 9.2
07_01_0639 - 4785446-4786186,4786429-4786656,4786727-4786872,478... 27 9.2
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 27 9.2
06_03_0412 + 20537957-20538214 27 9.2
04_03_0696 + 18797316-18797720 27 9.2
02_03_0106 + 15292869-15296138 27 9.2
02_02_0264 + 8404879-8405106 27 9.2
01_06_1402 + 37052996-37053449,37053533-37053630,37053718-370538... 27 9.2
01_01_0445 - 3319451-3320035 27 9.2
>04_04_1392 +
33201015-33201600,33202030-33202406,33202528-33202638,
33202720-33202815,33202899-33203570
Length = 613
Score = 127 bits (307), Expect = 5e-30
Identities = 66/150 (44%), Positives = 98/150 (65%), Gaps = 1/150 (0%)
Frame = +2
Query: 77 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDA- 253
+VL+ + +GA ELL + + +S EEL +IP DAL+VRS T+V ++V +A
Sbjct: 73 TVLVAEKLGAAGLELLRGFANVDCSYG-LSPEELRAKIPLCDALIVRSGTKVGRDVFEAS 131
Query: 254 GVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPAST 433
G +L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ ++R++ A
Sbjct: 132 GGRLRVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMSRNIAQADA 191
Query: 434 ALKAGRWDRALYTGSELAGKTLAILGLGRV 523
+LKAG+W R Y G L GKT+AILG G+V
Sbjct: 192 SLKAGKWQRNKYVGVSLVGKTIAILGFGKV 221
>06_03_0975 -
26471438-26472109,26472189-26472284,26472372-26472482,
26472494-26472530,26472566-26472576,26472674-26473050,
26474310-26474895
Length = 629
Score = 126 bits (305), Expect = 8e-30
Identities = 67/150 (44%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +2
Query: 77 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAG 256
+VL+ + +G ELL + +++ EEL ++ DALVVRSAT+VT+EV +A
Sbjct: 73 TVLVTEKLGDAGLELLRRFANVDCAY-ELTAEELRAKVSLVDALVVRSATRVTREVFEAA 131
Query: 257 V-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPAST 433
+L+VVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A
Sbjct: 132 RGRLRVVGRAGVGIDNVDLQAATEAGCLVVNAPTANTVAAAEHAIALLAAMARNVAQADA 191
Query: 434 ALKAGRWDRALYTGSELAGKTLAILGLGRV 523
+LKAG+W R Y G L GKTLAI+G G+V
Sbjct: 192 SLKAGKWQRNKYVGVSLVGKTLAIMGFGKV 221
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 493 LASELAASVQSPVPPASLQRSGSWDHVASQNQHQRAGQLARAQRI 359
LA L + +P P S + DH + H+RA L R R+
Sbjct: 3 LAPPLCHLLAAPPPSTSAAADAAHDHAGALAPHRRASPLRRRGRL 47
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 113 bits (272), Expect = 8e-26
Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 13/134 (9%)
Frame = +2
Query: 161 ISKEELLMEIPNHDALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVG 337
+S ELL ++ DAL+VRS T+VT+EVL+AG +L+VVGRAG G+DN+D+ +A + G
Sbjct: 106 MSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAATEAGCL 165
Query: 338 VINAPGANALSACELTCTLMLVLARHVVPASTALKA------------GRWDRALYTGSE 481
V+NAP AN ++A E L+ +AR+V A ALKA G+W R Y G
Sbjct: 166 VVNAPTANTVAAAEHGIALLASMARNVSQADAALKAVYSRTLTVFTAQGKWQRTKYVGVS 225
Query: 482 LAGKTLAILGLGRV 523
L GKTLA++G G+V
Sbjct: 226 LVGKTLAVMGFGKV 239
>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
Length = 454
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 203 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 382
A+V + V ++DA L++V G+D +D+D+ ++GV V N P +L
Sbjct: 50 AVVPYALQGVDAAMIDALPSLEIVSSFSVGIDRVDLDACLRRGVRVTNTPDVLTDDVADL 109
Query: 383 TCTLMLVLARHVVPASTALKAGRW-DRALYT-GSELAGKTLAILGLGRV 523
L + R + A ++AG+W + +T + +GK + ILGLGR+
Sbjct: 110 AVGLAIAALRKIPQADRYVRAGKWKSKGDFTLTTRFSGKRVGILGLGRI 158
>06_03_0085 +
16431503-16431568,16431981-16432152,16432402-16432464,
16432792-16433332,16433419-16433543,16433988-16434100,
16434565-16434678
Length = 397
Score = 55.2 bits (127), Expect = 3e-08
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +2
Query: 230 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLA 409
V+ E + L+++ AG G D+ID+ +A G+ V G+N +S E +L+L
Sbjct: 122 VSAERIKKAKNLELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILL 181
Query: 410 RHVVPASTALKAGRWDRA--LYTGSELAGKTLAILGLGRV 523
R+ +P + G W+ A Y +L GKT+ +G GR+
Sbjct: 182 RNFLPGYQQVVHGEWNVAGIAYRAYDLEGKTVGTVGAGRI 221
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 55.2 bits (127), Expect = 3e-08
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Frame = +2
Query: 119 LLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVD 298
+LN Y + A ++ + P +V A QV LDA L V GAGVD
Sbjct: 37 VLNFYESSAPLLAFLAAAAAGPDPPLAAVVVAGGAIQVNAAFLDAVPSLGCVVTTGAGVD 96
Query: 299 NIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRW-DRALY-T 472
+ID+ ++GV V A + + L++ + R + + ++ G W R Y
Sbjct: 97 HIDLAECARRGVAVAGAGTVFSTDVADHAVGLLVDVLRRISASDRYVRRGLWAARGDYPL 156
Query: 473 GSELAGKTLAILGLGRV 523
GS+L+GK + I+GLG +
Sbjct: 157 GSKLSGKHVGIIGLGSI 173
>06_03_0086 +
16458881-16458952,16461795-16461966,16462621-16462889,
16463045-16463316,16463409-16463533,16463852-16463964,
16464579-16464692
Length = 378
Score = 53.6 bits (123), Expect = 9e-08
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Frame = +2
Query: 134 GIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVD 313
GI + I +L+ P H A + T E + L+++ AG G D+ID+
Sbjct: 78 GINCELEKHIEDAHVLITTPFHPAYI-------TAERIKKAKNLELLLTAGVGSDHIDLP 130
Query: 314 SAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LYTGSELA 487
+A G+ V G+N +S E +L+L R+ +P + G W+ A + +L
Sbjct: 131 AAAAAGLTVAEITGSNTVSVAEDQLMRILLLLRNFLPGHHQIVNGEWNVAGIAHRTYDLE 190
Query: 488 GKTLAILGLGRV 523
GKT+ +G GR+
Sbjct: 191 GKTVGTVGAGRI 202
>04_01_0038 + 446314-446787,446829-447350
Length = 331
Score = 52.0 bits (119), Expect = 3e-07
Identities = 33/103 (32%), Positives = 52/103 (50%)
Frame = +2
Query: 203 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 382
AL+ VT +DA L++V + AGVD+I++ + ++G+ V NA A + A +
Sbjct: 52 ALLTVDLPAVTAAQIDALPALELVVASSAGVDHINLGACRRRGIAVTNAQNAFSADAADY 111
Query: 383 TCTLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILG 511
L++ + R V A ++ G W A LA K LA LG
Sbjct: 112 AVGLLVAVLRRVAAADAYVRRGAW-AAAAGDYPLASKVLADLG 153
>04_01_0037 + 444239-444667,444817-444825
Length = 145
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +2
Query: 203 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 382
A++V + T V+ +++ KL++V GVD+ID+D+ ++G+ V NA A +
Sbjct: 49 AVLVPALTPVSADLVARLPKLEIVVATSTGVDHIDLDACRRRGISVTNAGEVFAPDVADY 108
Query: 383 TCTLMLVLARHVVPASTALKAGRW 454
L++ + R V A L+ GRW
Sbjct: 109 AVGLVVAVLRRVAAAEAYLRRGRW 132
>04_01_0036 + 436592-437572
Length = 326
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +2
Query: 230 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLA 409
V E+LDA L+ + AG ++ID+ ++GV V NA G + + L+L +
Sbjct: 63 VGAELLDAVPSLRCIITVSAGTNHIDLRECARRGVQVANAGGIYSTDVADYAVGLLLDVL 122
Query: 410 RHVVPASTALKAG-----RWDRALYTGSELAGKTLAILGLGRV 523
RHV ++ G R L GS++ G+ + I+GLG +
Sbjct: 123 RHVSAGDRFVRRGLCPEQRGGDFLPLGSKIGGRRVGIIGLGSI 165
>02_01_0012 -
80014-80104,80190-80308,80480-80524,80726-80911,
81027-81101,81213-81304,81731-81803,81923-82004,
82096-82217,82249-82440,82682-82804
Length = 399
Score = 44.4 bits (100), Expect = 6e-05
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 20/98 (20%)
Frame = +2
Query: 290 GVDNIDVDSAGKKGVGVINAPGANAL-----------------SACELTCTLMLVLARHV 418
G +N+DV++A + G+ V N P ++A + EL +L L AR +
Sbjct: 68 GYNNVDVEAANRNGIAVGNTPVSSAALCFLISRLSYWMGVLTETTAELAASLSLAAARRI 127
Query: 419 VPASTALKAGRWDR---ALYTGSELAGKTLAILGLGRV 523
V A ++AG +D L+ G+ L G+T+ ++G GR+
Sbjct: 128 VEADQFMRAGLYDGWLPHLFVGNLLKGQTVGVIGAGRI 165
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 302 IDVDSAGKKGVGVINAPGA---NALSACELTCTLMLVLARHVVPASTALKAGRWDRALYT 472
+DV++A + + V PG+ NA+S E+ L L + R TA+K R D +
Sbjct: 118 VDVNAATEHKIKVARIPGSTTGNAVSCAEMAIYLTLGVLRKQKVMDTAVK--RKDLGIPV 175
Query: 473 GSELAGKTLAILGLGRV 523
G + GK++ ILG G +
Sbjct: 176 GDTIFGKSVLILGFGAI 192
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +2
Query: 158 KISKEELLMEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVG 337
++ EE+ I N+ +V++ + +++ ++KV+ + G G++ +DV++A + +
Sbjct: 28 EVGLEEVPDVIQNYHLCIVKNRL-IDSDIIAKASQMKVIMQYGVGIEGVDVNAATEHKIK 86
Query: 338 VINAPGA---NALSACELTCTLMLVLARHVV 421
V G+ NA+S E+ L L + R V
Sbjct: 87 VARINGSTTGNAVSCAEMAIYLTLGILRKQV 117
>04_01_0033 + 391565-391974,393484-393520,394959-395483
Length = 323
Score = 35.9 bits (79), Expect = 0.020
Identities = 24/94 (25%), Positives = 46/94 (48%)
Frame = +2
Query: 242 VLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVV 421
+ DA L+ V AGVD+ID+ ++GV V N+ + + +++ + R V
Sbjct: 74 LFDAVPSLRCVVSTAAGVDHIDLAECARRGVVVANSGTVYSGDVADHAVGMVIDVMRRV- 132
Query: 422 PASTALKAGRWDRALYTGSELAGKTLAILGLGRV 523
+A + G ++++GK + I+GLG +
Sbjct: 133 ---SAAERGYCMEKGIAETQVSGKRVGIIGLGNI 163
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 339 TPTPFLPAESTSMLSTPAPARPTTFSFTP 253
TPTP P ST M +TP P+ P T TP
Sbjct: 159 TPTPTTPYPSTPMPTTPYPSTPMTTPTTP 187
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 354 PGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 199
P + +PTP P ST +TP P+ P TP +T + T TT S
Sbjct: 144 PSSPSSPTPTTPNPSTPTPTTPYPSTP--MPTTPYPSTPMTTPTTPYTTPTS 193
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 31.5 bits (68), Expect = 0.43
Identities = 23/59 (38%), Positives = 28/59 (47%)
Frame = -1
Query: 420 TTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASN 244
TT R R +VSS LS+ PG P P P STS TP+P + TP +N
Sbjct: 21 TTRRPRRRTR-EVSSRYLSSTTPG----PVPSSPRLSTSSSRTPSPRAHRPRAATPFAN 74
>09_02_0082 - 4060018-4061604
Length = 528
Score = 31.5 bits (68), Expect = 0.43
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Frame = -1
Query: 525 PTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHAL--SALAP 352
P +P P +A P + P +P V TT R SS A+ +A AP
Sbjct: 257 PPVPAP-LAPTPPIPTPPALAPPVDVPPGFTVSPTTT-RYSFGYGGASSSSAMPHAATAP 314
Query: 351 GALITPTPFLPAES---TSMLSTPAPARPTTFSFTPAS 247
AL TP P L + +L+ PAPA P TPA+
Sbjct: 315 LALRTPAPHLRVSRKPRSLVLTPPAPAPPVATPPTPAT 352
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 31.1 bits (67), Expect = 0.57
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = +2
Query: 68 DIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVL 247
D +V+ V GVG+ C ++ A+G + + E+L N L KE
Sbjct: 241 DSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKL----QNARTLGATHTVNAAKE-- 294
Query: 248 DAGVKLKVVGRAGAGVDNIDVDSAGK 325
DA K+K + G GVD + V++ GK
Sbjct: 295 DAVEKIKEI-TDGRGVD-VAVEALGK 318
>06_03_0783 - 24546403-24546765,24547202-24547262,24547899-24548004,
24548118-24551600,24553134-24553179
Length = 1352
Score = 30.7 bits (66), Expect = 0.75
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Frame = +2
Query: 65 VDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPN-HDALVVRSATQVTKE 241
+DI + L+VD A L A G KAK+ E+L ++ + LV+ S V +
Sbjct: 706 IDIHTDLLVDLASAGNIPFLRAVGEFCVEKAKVQGLEILKDMNELQEFLVISSLENVNNK 765
Query: 242 VLDAGVKL---KVVGRAGAGVDNIDVDSAGKKGVGVINA 349
A +L + R D+ + DS K V NA
Sbjct: 766 DEAANAQLANKSQISRLKLQWDSSNADSKSDKEYDVFNA 804
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 30.7 bits (66), Expect = 0.75
Identities = 25/96 (26%), Positives = 38/96 (39%)
Frame = -1
Query: 525 PTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGA 346
P P AR +SSL S SA AG+ W + + + SS + A A +
Sbjct: 22 PHAPTTAAARSSSSSSLFPLFPLSAPEESSAPAAGSQWLSNPSFSFDASSLNIPATASSS 81
Query: 345 LITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 238
+ P P + PAPA+ ++P+ S
Sbjct: 82 V--PPPLSASSDEEEAPRPAPAKYDLLPYSPSPPAS 115
>02_04_0129 + 20020388-20021215
Length = 275
Score = 30.7 bits (66), Expect = 0.75
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 357 APGALITPTPFLPAESTSMLSTPAPARPTTFS 262
A A P PF P+ + +LSTP P TFS
Sbjct: 232 AGAAAAPPPPFAPSPRSLLLSTPTMPSPATFS 263
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 419 VPASTALKAGRWDRALYTGSELAGK 493
VP +TAL +WD+ YTGS G+
Sbjct: 184 VPETTALLEQKWDKIFYTGSGNVGR 208
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.5 bits (63), Expect = 1.7
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = -1
Query: 525 PTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGA 346
P P P A V P ++ L A + T R RT I++ + + A AP
Sbjct: 289 PATPAPP-ADVPPGFTVSPTTTCHSLGYDGASSSFATPRMRT-ISLALRAPAPHLRAPRT 346
Query: 345 LITPTPFLPAESTSMLSTPAPAR--PTTFSFTPASNTSLVT*VAERTTRASW 196
L P P PA +T + P P R PT + P ++ V+ TTR S+
Sbjct: 347 LAPPAPTPPAPATPVPMPPTPTRLVPTPPAPGPPADVPPRFTVSPTTTRPSF 398
>01_07_0311 +
42667114-42667132,42667336-42667367,42667449-42667822,
42667895-42668028,42668147-42668303,42668994-42669098,
42669342-42669645,42670404-42670478,42671467-42672589,
42673686-42673727,42674017-42674111,42674199-42674239,
42674375-42674414
Length = 846
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 507 RMARVLPASSLPVYR-ARSHLPAFSAVEAGTTWRARTNINVQV 382
+M RV A SLP+ + ARS + SA++AG WR ++ +
Sbjct: 395 KMLRVKIAHSLPLDQIARSIIRGLSALKAGRIWRVGNGSSIDI 437
>10_01_0320 + 3506183-3507109
Length = 308
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -3
Query: 481 LAASVQSPVPPASLQRSGSWDH--VASQNQHQRAGQLA-RAQRIGARSVDHSDAL 326
+AA +P PPAS +R+ + DH AS++ A A R +R SVD + L
Sbjct: 1 MAAPAPAPAPPASRKRAAAPDHEPTASRSSTPAAAAGAKRPRRYALASVDDYEQL 55
>02_01_0575 -
4264136-4264200,4264589-4264652,4264760-4264879,
4264906-4265002,4265365-4265437,4265534-4265630,
4265736-4266007,4266114-4266240,4266902-4267139,
4267508-4267620,4267722-4267762,4268569-4268788
Length = 508
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 523 DPAKAKDGEGLASELAASVQSPVPPASLQRSG-SWDHVASQNQHQRAGQ 380
D + G +S +S QSP PP + SG + H AS NQ ++G+
Sbjct: 42 DSPDSGTGGSASSSQESSSQSPPPPRGHRGSGDNTAHFASNNQFNQSGK 90
>07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331
Length = 599
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -1
Query: 465 RARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPG-ALITPTPFLPA 316
R R LPA AVE TT++ +++ A +A PG + P P PA
Sbjct: 345 RIREALPATPAVETPTTYQQIEEALMRLELAAAAARTPGDDTLLPQPMSPA 395
>03_06_0277 + 32814621-32814996,32815419-32815558,32816074-32816160
Length = 200
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 372 ALSALAPGALITPTPFLPAESTSMLSTP--APARPTTFSFTPAS 247
A +AL PGA P PA + P +PA PTT TPA+
Sbjct: 105 ARAALLPGACSVQAP--PASQCNAAGVPVSSPANPTTSGGTPAT 146
>12_02_0944 -
24666114-24666200,24666287-24666352,24666450-24666515,
24666607-24666825,24666927-24667403
Length = 304
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 101 GAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGVKLKVVGR 280
G+KCA A K + K+ + IPN + + + ++EV DAG K R
Sbjct: 160 GSKCARKAEPKR-AKKAKQTVEKDASVA-IPNGSCSISDNDSSSSQEVADAGATSKGKSR 217
Query: 281 AGAG 292
AG G
Sbjct: 218 AGRG 221
>06_03_0956 +
26296744-26297382,26297595-26297669,26298147-26298341,
26298426-26298559,26298713-26298779,26298985-26299043,
26299204-26299321,26299613-26299726,26299855-26299986,
26300076-26300492,26300904-26300954,26301303-26301373,
26302067-26302151,26302258-26302410,26302522-26302596,
26302755-26302844,26303953-26304000,26304081-26304195,
26305356-26305459,26305582-26305692
Length = 950
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 369 LSALAPGALITPTPFLPAESTSMLSTPAPA 280
++A+AP +L TP LP+ S ++ P PA
Sbjct: 1 MAAVAPPSLSTPVTILPSVSVALPPLPPPA 30
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 339 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 238
TP P P T TP PA P TPA+ T+
Sbjct: 64 TPPPATPTPPTPTPWTPTPATPPPTPATPATPTT 97
>08_01_0637 + 5537421-5539547
Length = 708
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 260 KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSA--CELTCTLMLVLARH 415
+L ++GR G G D +DV VG + A+ L A TC L++ +RH
Sbjct: 285 QLVILGREGHGYDRLDVAVTYVLLVGAVILETASLLRAMFSSWTCPLLVRWSRH 338
>06_01_0138 -
1051408-1051625,1052790-1052889,1053724-1054085,
1055055-1055079
Length = 234
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1
Query: 447 PAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPAR 277
PAFSAV + ++ A + ++ A A+A A T T +PA +T + P R
Sbjct: 174 PAFSAVPSAASFSAFRIVPAMATTVAFPAMATVAPATAT--VPAAATDTMGATVPFR 228
>03_02_0473 +
8745721-8745994,8746083-8746090,8746232-8746324,
8746665-8746893,8747314-8747420,8747560-8747622,
8747883-8747983,8748996-8749090,8749330-8749350,
8749987-8750082,8750188-8750308,8750415-8750570,
8750679-8750869,8751207-8751478,8751853-8751954,
8752006-8752038,8752132-8752308,8752397-8752466,
8752512-8752585,8752667-8752908,8752983-8753129,
8753526-8753751,8753893-8753970,8754378-8754521,
8754829-8755008,8755335-8755394,8755484-8755523,
8758653-8759137
Length = 1294
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -1
Query: 387 QVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSL 235
Q SS A +A A GAL P P PA+ S T + + T S A N +L
Sbjct: 33 QSSSSAAAAAAGGALGRPAP-APADRKSKRGTLSQIQNETISAAKALNKAL 82
>01_01_0218 + 1856104-1856700,1856814-1857452
Length = 411
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 372 ALSALAPGALITPTPFLPAES--TSMLSTPAPARPTTFSFTPASNT 241
++S+LAP + PTP P+ S T + P+P PT S + S T
Sbjct: 50 SVSSLAPSSTPMPTPTAPSPSPETPCVWPPSPPSPTDPSASMPSPT 95
>09_04_0115 - 14789499-14790288,14792055-14792441,14792820-14793193
Length = 516
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = -1
Query: 438 SAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 259
+A +A T +R S+ A S AP A +P A +T++ ++PA A PT +
Sbjct: 10 AAADASTGGGSRRGSVPGGSAAAASRAAPPA----SPTSAAAATTLGASPAAAPPTGPAS 65
Query: 258 TPASNTSLVT 229
+PA++ +L T
Sbjct: 66 SPAASPALQT 75
>05_07_0268 + 28830373-28830435,28830632-28830736,28831055-28831975
Length = 362
Score = 27.5 bits (58), Expect = 7.0
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -1
Query: 489 PASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAES 310
PA++ ++ R + + RA +I++ S SA + GA + P+P PA+
Sbjct: 109 PAAANDAHQPRPKIDGSVRRRRRRSARALVHISIDCSGPT-SARSVGAAVMPSPVAPAKD 167
Query: 309 TSML--STPAPARPTTFSFTPASNT 241
+ S RP + S++ +S+T
Sbjct: 168 VKAVIRSKARGGRPRSPSYSCSSST 192
>05_05_0091 + 22319411-22320901
Length = 496
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 367 ERVRADLHVDVGSGSPRGPSFHCAEGWQVGPGSVHWQR 480
+R L +++ S S HC + WQ P V W++
Sbjct: 283 QRRDVPLRIEMSSNSCPIIRSHCQQPWQTSPPGVDWRK 320
>04_04_0845 -
28646547-28646637,28646724-28646854,28647832-28647938,
28648043-28648121,28648578-28648667,28648814-28649065,
28649367-28649519,28649631-28649955,28650069-28650283
Length = 480
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = +1
Query: 442 GW--QVGPGSVHWQRARWQDPR--HPWPWQGR 525
GW V P +VH ++DP +PW WQG+
Sbjct: 378 GWGIMVCPPAVHLNPEIYEDPLAFNPWRWQGK 409
>04_04_0263 +
24030132-24030539,24031575-24031586,24032023-24032267,
24032380-24032900,24033387-24033877
Length = 558
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -2
Query: 524 RPCQGQGWRGSCQRARCQCTEPGPTCQPSAQW 429
R C G+ +C+C P C P +QW
Sbjct: 496 RVCLEASPDGNITTNQCKCLTVDPNCNPESQW 527
>03_01_0154 - 1223879-1224274,1224391-1224585
Length = 196
Score = 27.5 bits (58), Expect = 7.0
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = -1
Query: 525 PTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSA-LAPG 349
P RPR+A VL +S+PV + A + G R++ QV +H + L
Sbjct: 21 PEAQRPRLADVLSDASIPVVDLANPDRAKLVSQVGAA--CRSHGFFQVLNHGVPVELTLS 78
Query: 348 ALITPTPF--LPAESTSMLSTPAPARPTTFS 262
L F LPAE + L + PA+ S
Sbjct: 79 VLAVAHDFFRLPAEEKAKLYSDDPAKKIRLS 109
>03_01_0138 -
1089063-1089266,1089590-1089671,1089937-1090390,
1091094-1091634
Length = 426
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 348 ALITPTPFLPAESTSMLSTPAPA 280
AL P F PA+S S++ PAPA
Sbjct: 181 ALAQPISFNPAQSASIVDEPAPA 203
>01_01_0148 - 1337494-1338057
Length = 187
Score = 27.5 bits (58), Expect = 7.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 464 EPGPTCQPSAQWKLGP 417
+PG +C PS++W GP
Sbjct: 109 DPGTSCAPSSEWPWGP 124
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -1
Query: 339 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERT 211
TP P PA+S +TPAP T PA + VA T
Sbjct: 39 TPVPTAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVT 81
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.1 bits (57), Expect = 9.2
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 480 SLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSM 301
SLPV L A SA++ GT RAR++ Q++ L +P L A ++S
Sbjct: 273 SLPVSDEPRELCASSALQPGTVMRARSHA-CQMAKQGKEKTKLATLNISSPLLDAVTSSG 331
Query: 300 LSTPAPA-RPTTF 265
S A R T F
Sbjct: 332 WSPSTDAGRRTAF 344
>10_06_0169 +
11420115-11420163,11420922-11421041,11421938-11422053,
11422125-11422213,11422413-11422455,11423296-11423440,
11423581-11423688,11423767-11424086,11424255-11424671,
11424776-11425470,11425564-11426107,11426338-11426682,
11426799-11426909
Length = 1033
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = -1
Query: 372 ALSALAPGALITPTPFLPAEST 307
AL A APGAL P P PAEST
Sbjct: 710 ALGA-APGALTDPHPNYPAEST 730
>08_02_0805 +
21400345-21400701,21400797-21400975,21401223-21401271,
21401310-21401390,21401988-21402605
Length = 427
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +1
Query: 361 CAERVRADLHVDVGSGSPRGPSFHCAEGWQVGPGSVHWQRARWQDPRHPWPW 516
CA+ + G + G S CA G + G W+R+ D R W W
Sbjct: 304 CADNTGDEQDGGGGRAADAGDSDGCAAGMEDKGGRARWRRS--CDRRRRWGW 353
>07_03_1346 +
25927043-25927333,25927867-25927929,25928005-25928093,
25928177-25928237,25928848-25929009,25929099-25929257,
25929351-25929427,25929515-25929654,25929752-25929783,
25929877-25929951,25930268-25930340,25930456-25930544,
25930781-25930933,25931023-25931127
Length = 522
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -1
Query: 405 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPA 286
RT I+ + + ALS++A +++T L +S++ ++TPA
Sbjct: 447 RTEISWALITAALSSVARTSMVTMQDILGLDSSARMNTPA 486
>07_01_0639 -
4785446-4786186,4786429-4786656,4786727-4786872,
4786986-4787186,4787256-4787432,4787741-4788359
Length = 703
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 457 VPPASLQRSGSWDHVASQNQHQRAGQLARAQRIGA 353
VPP ++ G +DH A + H+ G+ A A GA
Sbjct: 28 VPPGTVSSGGDFDHAAGETGHR--GRPALADDAGA 60
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 393 NVQVSSHALSALAPGALI-TPTPFLPAESTSMLSTPAPARPTTFSFTPA 250
N ++ A PG TPTP PA S S P P+ PT + P+
Sbjct: 135 NTSIAPSASPPSTPGGPAPTPTPTRPAPSPSPTGPPTPS-PTNPNLEPS 182
>06_03_0412 + 20537957-20538214
Length = 85
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 212 VRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKG 331
+RSA DAGV++ G+ G D ++ + G++G
Sbjct: 12 IRSAEASFSRCGDAGVEVVESGKVGGSDDGVEAVTVGRRG 51
>04_03_0696 + 18797316-18797720
Length = 134
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 359 NALSACELTCTLMLVLARHVVPASTALK--AGRWDRALYTGSELA-GKTLA 502
NA +AC L+ +VPA++A K AG+ D A T +E A G T+A
Sbjct: 4 NAATACSTLLLLIAAATTLLVPAASAAKLVAGK-DAATATAAEAALGSTVA 53
>02_03_0106 + 15292869-15296138
Length = 1089
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 161 ISKEELLMEIPNHDALV----VRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKK 328
I K L EI N + + +R ++TK++ D K++ AG GV+ +++S K+
Sbjct: 209 IGKTMLAREIYNDERMTETFPIRVWVKMTKDLTDVDFLKKIIIGAGGGVNVGEIESK-KE 267
Query: 329 GVGVINA 349
+G++++
Sbjct: 268 LLGIVSS 274
>02_02_0264 + 8404879-8405106
Length = 75
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 366 SALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRA 202
+A P + TP+ P S+S STP P S +S+VT +R + A
Sbjct: 20 TASVPPHAPSRTPYPPLPSSSSSSTPTPTPVLAVSREYRLTSSMVTQCGDRESNA 74
>01_06_1402 +
37052996-37053449,37053533-37053630,37053718-37053888,
37054017-37054117,37054928-37055063,37055155-37055205,
37055311-37055598,37055896-37056130,37056408-37056523,
37057300-37057496,37057739-37057745
Length = 617
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 417 TWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 268
+W RT +VS +++ ++ + + PAE+ S L + PARP +
Sbjct: 30 SWAKRTGFQSRVSGESVAIVSASSSGQVSLPRPAEAPSDLESGPPARPNS 79
>01_01_0445 - 3319451-3320035
Length = 194
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -2
Query: 452 TCQPSAQWKLG---PRGEPEPTSTCRSARTRSAHWR 354
+C+ W L P E + TCR A+ R+A WR
Sbjct: 67 SCEHRNSWSLDGARPLRGAEVSVTCRDAKNRAAWWR 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,674
Number of Sequences: 37544
Number of extensions: 332728
Number of successful extensions: 2000
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1975
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -