Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32078
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical...    30   1.4  
U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical...    30   1.9  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF040661-16|AAG24218.1|  318|Caenorhabditis elegans Hypothetical...    28   7.5  

>AL132949-22|CAB70112.2|  603|Caenorhabditis elegans Hypothetical
           protein Y53F4B.25 protein.
          Length = 603

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 177 YFILINNFKKCFLCCKIIMECFLCNSLCENSTFREK 70
           Y  LIN  +K  LCC+      LC +LC   TF +K
Sbjct: 478 YVPLINPNQKLDLCCRKQRISPLCQNLCNFDTFNDK 513


>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -1

Query: 485 PNNFLCENSQ*W*LTEVAMIKYVDLIIFKNFKEIKKLIIVNVNSTKN 345
           PN + CE+   W L ++ M KY DLI  K+  + K L+ +     K+
Sbjct: 11  PNEWRCEDVGNW-LKKIGMAKYADLIAMKHKVDGKCLLALTDTDLKD 56


>AL132948-46|CAD31837.2|  473|Caenorhabditis elegans Hypothetical
           protein Y39B6A.27 protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -3

Query: 129 IIMECFLCNSLCENSTFREKREKVKKFNKDFWLSCKTFLSAR 4
           I++  FL +   ENS   E  EK +KF + F L+C+T +S +
Sbjct: 208 IVIFSFLPSKSVENSL--ESGEKPQKFGESFKLTCRTVISPK 247


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
           protein F55H12.3 protein.
          Length = 2972

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -3

Query: 324 RLGFCILLLQLSHTGTAVRMRRALLTAY*VSHVSVD-HKPANIFSVDHVFYFILINNFKK 148
           ++  C+LL QLSH       R A   +   S VS +     N+ S D   + + I +F  
Sbjct: 13  KISMCVLLHQLSHVHFECSFRLAPRASKEKSTVSGNAENERNMISDDKHSFSLFIYSFIS 72

Query: 147 CFL 139
           CFL
Sbjct: 73  CFL 75


>AF040661-16|AAG24218.1|  318|Caenorhabditis elegans Hypothetical
           protein W10G11.11 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 171 ILINNFKKCFLCCKIIMECFLCN 103
           + +NNFK+C   C  I +C + +
Sbjct: 50  VQVNNFKECIAKCSAIFDCIIAS 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,946,493
Number of Sequences: 27780
Number of extensions: 270419
Number of successful extensions: 675
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)