Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32077
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70310-4|CAA94368.1|  347|Caenorhabditis elegans Hypothetical pr...    95   3e-20
U29535-7|AAM81113.1|  275|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AF003140-1|ABR92609.1|  538|Caenorhabditis elegans Hypothetical ...    29   4.0  
AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z92834-12|CAB07392.5|  424|Caenorhabditis elegans Hypothetical p...    27   9.2  
Z81569-2|CAB04602.4|  424|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z70310-4|CAA94368.1|  347|Caenorhabditis elegans Hypothetical
           protein R11A8.5 protein.
          Length = 347

 Score = 95.5 bits (227), Expect = 3e-20
 Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = +3

Query: 387 VINDSDTSNLSLVLFQYRTCPFCCKVRAYLDARGISYEVVEVDAVLRQAIKWS-GYKKVP 563
           VIN  D SNL L L+QY TCPFCCKVRA+LD  G SYEVVEV+ V R  IK+S  YKKVP
Sbjct: 55  VINHLDKSNLKLRLYQYETCPFCCKVRAFLDYHGFSYEVVEVNPVTRSQIKFSTTYKKVP 114

Query: 564 IVLAKVDGGYQQLLDSAAIISILETYLLDKKSQLTEI 674
           I+ +    G   + +S  IIS L TYL      L +I
Sbjct: 115 ILRS----GETTMTESTLIISTLATYLQRPDQSLDQI 147


>U29535-7|AAM81113.1|  275|Caenorhabditis elegans Hypothetical
           protein C25H3.7b protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +3

Query: 447 PFCCKVRAYLDARGISYEVVEVDAVLRQAIKWSGYKKVPIVLAKVDGGYQQLLDSAAIIS 626
           P+C K+  +L A  I +EVV     LRQ    S    +P +  +++G  QQ+ DS  I+ 
Sbjct: 57  PYCLKIETFLRANRIKHEVVGTWLTLRQ----SPRGLLPFI--ELNG--QQISDSQVIVW 108

Query: 627 ILETYL-LDKK 656
            L+ +  LD K
Sbjct: 109 KLQKHFDLDDK 119


>AF003140-1|ABR92609.1|  538|Caenorhabditis elegans Hypothetical
           protein C44E4.5 protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 232 NLTVDLGRDLVENNVLDCCKFSFSDGTTIFLNS 134
           +LTV+   DL++N   + C F+ ++G  IFL+S
Sbjct: 206 SLTVEKSMDLIQNGHFETCTFT-NNGEIIFLSS 237


>AC024792-2|AAF60680.2|  813|Caenorhabditis elegans Hypothetical
           protein Y48G1A.4 protein.
          Length = 813

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +3

Query: 300 INAKKRTLPQENEEYAFLKQAPKYTPQYCVINDSDTSNLSLVLFQYRTC 446
           +   K++ P+  E   F+ + PK   ++C + +  + ++ LVL +   C
Sbjct: 368 VKKAKKSAPEPAETLPFVFEMPKNYKKFCALLEKHSESMDLVLERLVKC 416


>Z92834-12|CAB07392.5|  424|Caenorhabditis elegans Hypothetical
           protein K11B4.1 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 294 YKI-NAKKRTLPQENEEYAFLKQAPKYTPQYCVINDSDTSNLSLVLFQYRTC 446
           YK+ ++ K     E+ EYA ++   KY P+  +   +D  N  + L Q+  C
Sbjct: 93  YKLRHSVKAAEKLESSEYAIVRLLLKYQPETIITLANDPINYGVFLNQHLAC 144


>Z81569-2|CAB04602.4|  424|Caenorhabditis elegans Hypothetical
           protein K11B4.1 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 294 YKI-NAKKRTLPQENEEYAFLKQAPKYTPQYCVINDSDTSNLSLVLFQYRTC 446
           YK+ ++ K     E+ EYA ++   KY P+  +   +D  N  + L Q+  C
Sbjct: 93  YKLRHSVKAAEKLESSEYAIVRLLLKYQPETIITLANDPINYGVFLNQHLAC 144


>AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical
           protein K10F12.4a protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 426 LFQYRTCPFCCKVRAYLDARGISYEVVEVD 515
           L+  R CP+  +V  YL  + I  EVV V+
Sbjct: 101 LYSMRFCPYAQRVLIYLAKKNIPVEVVNVN 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,945,224
Number of Sequences: 27780
Number of extensions: 272420
Number of successful extensions: 646
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)