Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32076
         (552 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0724 + 5529642-5531141                                           35   0.050
03_06_0363 - 33385641-33386201,33386421-33386894,33387013-33387429     34   0.087
04_04_1239 + 32000383-32001007,32001167-32002221                       33   0.20 
07_01_0720 + 5512638-5513141,5513588-5514607                           31   0.61 
12_02_0775 - 23049842-23051299                                         31   0.81 
07_01_0722 + 5522862-5523410                                           29   1.9  
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13...    29   3.3  
10_01_0111 + 1384737-1386215                                           28   4.3  
06_01_0793 - 5918912-5919793,5919830-5920285                           28   4.3  
04_03_0627 + 18147789-18148052,18148492-18148955,18149863-18150043     27   7.5  

>07_01_0724 + 5529642-5531141
          Length = 499

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +2

Query: 53  PARILGLFPHIGKSHQMAYDPLLRRLAERGHDVTAVTFFPLKNPPEHYRAVSLEGLTEIR 232
           P   L +FP +   H + +  L +RLA RGH   AVTF           A+  E    +R
Sbjct: 27  PPLHLVMFPWLAFGHLIPFLQLAKRLAARGH--AAVTFLATPRNASRLAALPPELAAYVR 84

Query: 233 VESINMSIYEG 265
           V S+ + + +G
Sbjct: 85  VVSLPLPVLDG 95


>03_06_0363 - 33385641-33386201,33386421-33386894,33387013-33387429
          Length = 483

 Score = 33.9 bits (74), Expect = 0.087
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 71  LFPHIGKSHQMAYDPLLRRLAERGHDVTAVT 163
           +FP +   H + Y  L +RLA RGHDVT V+
Sbjct: 13  VFPWLAFGHMIPYLELSKRLAARGHDVTFVS 43


>04_04_1239 + 32000383-32001007,32001167-32002221
          Length = 559

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +2

Query: 71  LFPHIGKSHQMAYDPLLRRLAERGHDVTAVTFFP--LKNP--PEHY 196
           LF  +GK   ++++ L+R   ERGHD  A+  F   LK    P+HY
Sbjct: 170 LFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHY 215


>07_01_0720 + 5512638-5513141,5513588-5514607
          Length = 507

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 71  LFPHIGKSHQMAYDPLLRRLAERGHDVTAVT 163
           +FP +   H + +  L +RLA RGH VT VT
Sbjct: 28  VFPWLAFGHMIPFLELSKRLASRGHAVTFVT 58


>12_02_0775 - 23049842-23051299
          Length = 485

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 53  PARILGLFPHIGKSHQMAYDPLLRRLAERGHDVTAVT 163
           P R++ +FP +   H + Y  L  R+A RGH V+ V+
Sbjct: 8   PLRVV-IFPWLAFGHLLPYMELAERMASRGHHVSFVS 43


>07_01_0722 + 5522862-5523410
          Length = 182

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 71  LFPHIGKSHQMAYDPLLRRLAERGHDVTAVT 163
           +FP +   H + +  L +RLA RGH VT V+
Sbjct: 32  VFPWLAFGHMIPFLELSKRLASRGHAVTFVS 62


>05_01_0019 -
           129767-129931,130078-130257,130491-130728,130833-131236,
           131284-131427,131709-131995,132071-132150,132563-132714,
           132793-132909,133292-133450,133546-133946,134106-134423,
           135050-135095,135203-135310
          Length = 932

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -1

Query: 384 KGLKLTNFEHVSKAKSANG*FSLMCDRILSNPVSR 280
           KGL + +  ++ + ++A+G  SL    IL+NP+SR
Sbjct: 84  KGLDILSLSNLMRQENASGSPSLSWGEILTNPISR 118


>10_01_0111 + 1384737-1386215
          Length = 492

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 65  LGLFPHIGKSHQMAYDPLLRRLAERGHDVTAVT 163
           L +FP +   H + Y  L  R+A RGH V+ V+
Sbjct: 15  LVIFPWLAFGHLLPYLELAERVASRGHRVSFVS 47


>06_01_0793 - 5918912-5919793,5919830-5920285
          Length = 445

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 65  LGLFPHIGKSHQMAYDPLLRRLAERGHDVTAVT 163
           L +FP +   H + Y  L  R+A RGH V+ V+
Sbjct: 14  LVIFPWLAFGHLLPYLELAERVASRGHRVSFVS 46


>04_03_0627 + 18147789-18148052,18148492-18148955,18149863-18150043
          Length = 302

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 154 GDIVSSLSQSS*QRIVCHLMTFSDMRE 74
           GD V+ L+Q S   +VCHL T + M +
Sbjct: 5   GDTVAKLAQLSGANLVCHLQTTNRMAD 31


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,314
Number of Sequences: 37544
Number of extensions: 302745
Number of successful extensions: 797
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)