BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32076
(552 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles ... 23 5.0
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 23 5.0
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 23 5.0
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 5.0
CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase ... 23 6.7
CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 23 6.7
AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein. 23 8.8
>U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S13 mRNA, complete
cds. ).
Length = 151
Score = 23.4 bits (48), Expect = 5.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 67 RSVPSYRKKSSNGIRSFVTKIG 132
RSVPS+ K S+ ++ + K+G
Sbjct: 20 RSVPSWLKLSAEDVKEQIKKLG 41
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.4 bits (48), Expect = 5.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 176 KNPPEHYRAVSLEGLTEIRVESINMSIY 259
+NPP+H + GL E + ++ S Y
Sbjct: 167 ENPPDHVESFERSGLREEVMTNVRKSSY 194
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 23.4 bits (48), Expect = 5.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 324 FSLMCDRILSNPVSRRKTLCPS*IDMLILSTLISVSPSRL 205
F L CD + NP + + P ID+ L+ + PSRL
Sbjct: 118 FDLKCDSVCVNPYHYERVVSPG-IDLSGLT--LQSGPSRL 154
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.4 bits (48), Expect = 5.0
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 315 MCDRILSNPVSRRKTLCPS*IDMLILSTLIS 223
+C+ + SNP++ K+ + + LST +S
Sbjct: 376 ICEPVYSNPINNMKSALTGELKICRLSTTVS 406
>CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase
protein.
Length = 573
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -3
Query: 205 DCSVMFRWIFQGKECYGGDIVS-SLSQSS*QRIVCHLMTFSD 83
DC RW+ +GGD S ++ +S + HL+ +D
Sbjct: 190 DCLQALRWVRSNIAAFGGDPNSVTIFGNSAGAALVHLLVLTD 231
>CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase
protein.
Length = 562
Score = 23.0 bits (47), Expect = 6.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 205 DCSVMFRWIFQGKECYGGD 149
DC + +W+ Q +GGD
Sbjct: 175 DCVMALQWVRQNIAAFGGD 193
>AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein.
Length = 99
Score = 22.6 bits (46), Expect = 8.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 27 CSCL*KMCCRLEFSVCSLISEKVIKWHTIL 116
CSC CC ++ +C ++K+I HT L
Sbjct: 74 CSCTFHWCCEVKCKLCR--AKKII--HTCL 99
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,112
Number of Sequences: 2352
Number of extensions: 12364
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -