Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32072
(300 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 66 4e-12
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 65 8e-12
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 58 1e-09
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 29 0.89
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 29 0.89
04_04_1638 + 34974369-34974764 28 1.2
06_03_0885 + 25677243-25678157,25681064-25681705 28 1.6
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 28 1.6
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 27 2.1
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 27 2.1
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 27 2.7
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 27 2.7
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652... 27 3.6
06_03_0889 + 25702777-25703439 27 3.6
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 27 3.6
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 26 4.7
12_01_0167 - 1250619-1250699,1250824-1250910,1250992-1251110,125... 26 4.7
08_02_1620 - 28288152-28288353,28288469-28288557,28288634-282888... 26 4.7
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 26 4.7
06_03_0897 + 25762154-25763056,25764189-25764800 26 4.7
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 26 4.7
10_06_0177 + 11500330-11500755,11500937-11501383,11501651-11501764 26 6.3
03_02_0341 - 7643426-7643973,7644340-7644505 26 6.3
02_01_0646 + 4824243-4825139,4825220-4825852 26 6.3
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 26 6.3
11_04_0381 - 16999529-16999778,16999855-17000102 25 8.3
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 25 8.3
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 25 8.3
07_03_0908 + 22507565-22507810,22507925-22508872,22509314-225103... 25 8.3
06_03_0896 + 25753377-25754325,25755081-25755691 25 8.3
06_03_0891 + 25708864-25709596,25709629-25709729,25710047-257102... 25 8.3
06_01_0768 + 5742938-5743196,5743291-5744729 25 8.3
04_03_1035 - 21887562-21890030 25 8.3
03_05_0042 + 20180151-20180468,20181595-20181665,20182929-201830... 25 8.3
02_04_0508 - 23550785-23551219,23551717-23552670 25 8.3
01_01_0494 + 3651813-3652094,3652692-3652844,3653810-3653924,365... 25 8.3
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 66.5 bits (155), Expect = 4e-12
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +2
Query: 50 MANRGTKLCFDIVRTYSTAKMPPTDF--VPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 223
+A RG V T + A DF VP PY GPS ++ + + ++ PS+ + Y KP
Sbjct: 5 IARRGLSRLAAAVETAAVAPPRMADFNHVPLPYDGPSAAEIARKRAEFLSPSLFHFYSKP 64
Query: 224 VLLTQGHMQWLYDNDGKRYLDLFGG 298
+ + +G MQ+L+D G+RYLD F G
Sbjct: 65 LNIVEGKMQYLFDERGRRYLDAFAG 89
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 65.3 bits (152), Expect = 8e-12
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 110 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDL 289
MPP + PRPY G S ++ + ++ S+ Y+KP+ + +G MQ+LYD +GKRYLD
Sbjct: 51 MPPFEHRPRPYAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYLYDENGKRYLDC 110
Query: 290 FGG 298
FGG
Sbjct: 111 FGG 113
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 58.4 bits (135), Expect = 1e-09
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Frame = +2
Query: 107 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLT-------QGHMQWLYDN 265
KMPP D+ P PY GP +++ + + ++ PS+ + Y +P + + ++L+D
Sbjct: 44 KMPPFDYTPPPYDGPRAEEISRKRAEFLSPSLFHFYDRPWAYRHPRFGSYRDYHKYLFDE 103
Query: 266 DGKRYLDLFGG 298
DG+RYLD FGG
Sbjct: 104 DGRRYLDAFGG 114
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 28.7 bits (61), Expect = 0.89
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 18 CNRLNRRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRT 143
C+R N S++ ++ + S SS ++ P C R+S D+T
Sbjct: 278 CDRRAIMNRSEYFLQTHDSPSDSSYQSLSPDCTSRLSPKDQT 319
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 28.7 bits (61), Expect = 0.89
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 221 PVLLTQGHMQWLYDNDGKRYLDLFGG 298
P+++ + ++YD DGK+YLD G
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAG 536
>04_04_1638 + 34974369-34974764
Length = 131
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +1
Query: 85 RQNVQHGQNAADGFRAQTVHGTFVPTSRTNERSLHAAFNHERL*EAGASH 234
R HG A G R F P + R HAA +R A SH
Sbjct: 61 RHQTSHGAVAGRGLRRNRNTSMFAPPAHGEIRGAHAASKRKRKSNAADSH 110
>06_03_0885 + 25677243-25678157,25681064-25681705
Length = 518
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 188 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 102
CK+L + + GT+V VWA +WP
Sbjct: 387 CKVLGYDVPRGTQVLVNVWAIGRDPRYWP 415
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 189 M*TPFICSTCWYEGPVYGLG 130
M T ICSTC+YE V G+G
Sbjct: 1274 MSTGLICSTCYYEVEVPGVG 1293
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 200 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGG 298
I Y + V+L G LYD DG+ YLD+ G
Sbjct: 78 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAG 111
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 200 ITNAYKKP-VLLTQGHMQWLYDNDGKRYLDLFGG 298
I Y + V+L G LYD DG+ YLD+ G
Sbjct: 74 IVGTYNRSRVVLVAGRGCKLYDADGREYLDMAAG 107
>07_03_0111 + 13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = +2
Query: 26 PQQEKHIEMANRGTKLCFDIVRTYSTAKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSIT 205
P H M G LC Y A P P P+ P Y Q + + P + T
Sbjct: 1632 PMHPGHSTMVPSGPPLCTSPHHLYPPAPRSPNLLHPVPFIYPPYSQPQVIPSSTFPMN-T 1690
Query: 206 NAYK 217
N ++
Sbjct: 1691 NIFR 1694
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 109 NAADGFRAQTVHGTFVPTSRTNERSLHAAF--NHERL*EAGASHPGAHAVVI 258
N A HG P + ++ + AA NH R +P AHAV +
Sbjct: 61 NPNPSHHATAAHGILYPVATSSAAAAAAAATANHRRAPAVAVGYPRAHAVAV 112
>10_02_0192 +
6517985-6518348,6518647-6518699,6519984-6520021,
6522332-6522717,6523752-6523822,6524620-6524732,
6525019-6525337,6525576-6525886,6526493-6527069,
6530483-6530538,6531643-6532126
Length = 923
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 134 WARNPSAAFWPCCTF*RCRSIILFLY*PFRCVSPVEAIA 18
W R P WPC + + R ++ L RC V +A
Sbjct: 14 WPRLPRLPPWPCASHAQRRRVLRLLPPRRRCAGAVRVVA 52
>06_03_0889 + 25702777-25703439
Length = 220
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 188 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 102
C++L + + GT+V VWA +WP
Sbjct: 87 CRVLGYDVPRGTQVLVNVWAIGRDERYWP 115
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 297 PPNRSRYLLPSLSYNHCMCPWV 232
PP L ++SY HC C W+
Sbjct: 400 PPVPWLVLTDAISYGHCQCQWL 421
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 188 MPPSITNAYKKPVLLTQGHMQWLYDNDG 271
MPP T KPVL +G QW ++ G
Sbjct: 432 MPPRPTRDEDKPVLTPKGDRQWQANDFG 459
>12_01_0167 -
1250619-1250699,1250824-1250910,1250992-1251110,
1251200-1251478,1252246-1252660
Length = 326
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -3
Query: 184 NSFHLFYLLVRRSRVRSGHEIRRRHFGRAVRS--DDVEA*FCSSISHFDVFLLLR-RLQY 14
+ FHL YL + SRVR +E+ RA + + V F F +FL+ R RL Y
Sbjct: 139 DKFHLTYLYMYISRVRVANELGAGSARRAKFAIFNVVTTSFSIGFMLFVLFLIFRGRLAY 198
Query: 13 VTLE 2
+ E
Sbjct: 199 IFTE 202
>08_02_1620 -
28288152-28288353,28288469-28288557,28288634-28288828,
28289082-28289423,28290227-28291672,28292590-28292666,
28293160-28294509,28295921-28296029,28296896-28297007,
28297800-28297957
Length = 1359
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +2
Query: 32 QEKHIEMANRGTKLCFDIVRTYSTAKMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNA 211
Q+K A RG + STA+ T + +YQ V+ +K Y P + +
Sbjct: 559 QQKQFMQAQRGLQEVSSSTSVDSTAQTGHTGTGTGDWQEEAYQMVKNLKDQYF-PELNDL 617
Query: 212 YKKPVLLTQ 238
Y K L Q
Sbjct: 618 YNKISLKLQ 626
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 26.2 bits (55), Expect = 4.7
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 221 PVLLTQGHMQWLYDNDGKRYLDLFGG 298
P+++ + ++YD +GK+Y+D G
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAG 147
>06_03_0897 + 25762154-25763056,25764189-25764800
Length = 504
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 197 KAACKLLSFVLLVGTKVPCTVWARNPSAAFW 105
+ C++L F + GT V +WA N +W
Sbjct: 380 RTTCQVLGFDVPKGTMVLVNMWAINRDPKYW 410
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 197 KAACKLLSFVLLVGTKVPCTVWARNPSAAFW 105
+ CK++ + +L GT V VWA +W
Sbjct: 62 RETCKVMGYDVLKGTCVFVNVWALGRDPKYW 92
>10_06_0177 + 11500330-11500755,11500937-11501383,11501651-11501764
Length = 328
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 36 RNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTR 146
+ +W +++ +AS+SS+ ARP + + R R
Sbjct: 58 QGVDEWEVDQDQHASSSSKVAARPPVKAAAAAGKRKR 94
>03_02_0341 - 7643426-7643973,7644340-7644505
Length = 237
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +2
Query: 122 DFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGH 244
D P P T P ++ VY PP T Y P H
Sbjct: 197 DHKPAPVTVPDHKPPSTTTPVYAPPKPTPIYGPPTQQKNKH 237
>02_01_0646 + 4824243-4825139,4825220-4825852
Length = 509
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 191 ACKLLSFVLLVGTKVPCTVWARNPSAAFW 105
ACK+ + + GT V WA AA W
Sbjct: 382 ACKVFGYDVPAGTMVLVNAWAIGRDAAAW 410
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 9 VTYCNRLNRRNTSKWLIEEQNYAS 80
VTY N+L +N K L+E N S
Sbjct: 356 VTYANKLEAKNAFKALLESSNVES 379
>11_04_0381 - 16999529-16999778,16999855-17000102
Length = 165
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 188 MPPSITNAYKKPVLLTQGHMQWLYDNDG 271
MPP T KPV+ +G QW ++ G
Sbjct: 64 MPPRPTRDEDKPVMTPKGDRQWQANDFG 91
>11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 226 HRLLIGVRD*RRHVNSFHLFYLLVRRSRVRSGHEIR-RRHFGRAVRSDDVE 77
HR G+ +R ++ H+F + V+ S +G R R F ++ DD E
Sbjct: 862 HRFFAGMTTTQRSESANHVFKMFVKPSSSMNGFVKRYDRFFNEKLQKDDSE 912
>08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 25.4 bits (53), Expect = 8.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 74 CFDIVRTYSTAKMPPTDFVPRPYTGPSY 157
CF VR Y T K PP P GP Y
Sbjct: 2081 CFFRVRDYKTVKSPPVLISPLD-LGPKY 2107
>07_03_0908 +
22507565-22507810,22507925-22508872,22509314-22510337,
22510425-22510477
Length = 756
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 11 DILQSPQQEKHIEMANRGTKLCFDIVRTYSTAKMPPTDFVPRP---YTGPSYQQVEQMKG 181
D+L +Q + + R T+L D+ + ST K PP + + YT +++ E+
Sbjct: 491 DLLSFFKQFERVLCDRRSTELQADVDASQSTKKPPPMRVLRQASNIYTPAAFKMFEREFE 550
Query: 182 VYMPPSITN 208
+YM + N
Sbjct: 551 LYMDCMLYN 559
>06_03_0896 + 25753377-25754325,25755081-25755691
Length = 519
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 197 KAACKLLSFVLLVGTKVPCTVWARNPSAAFW 105
+ C++L F + GT V +WA N +W
Sbjct: 423 RTTCQVLGFDVPKGTIVLVNMWAINRDPKYW 453
>06_03_0891 +
25708864-25709596,25709629-25709729,25710047-25710259,
25710328-25710969
Length = 562
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 188 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 102
C++L + + GT+V WA +WP
Sbjct: 431 CRVLGYDVTRGTQVLVNAWAIGLDERYWP 459
>06_01_0768 + 5742938-5743196,5743291-5744729
Length = 565
Score = 25.4 bits (53), Expect = 8.3
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 164 VEQMKGVYMPPSI--TNAYKKPVLLTQGHMQWLYDNDGKRY 280
VEQ + P+ T A K VL+T G W YDN RY
Sbjct: 395 VEQEPSSFPAPAAAATAARSKAVLMT-GLNSWYYDNIRSRY 434
>04_03_1035 - 21887562-21890030
Length = 822
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 240 GTCSGYTTTTARDTWICS 293
GTCS Y+ A D ++CS
Sbjct: 87 GTCSPYSAVVAGDGYLCS 104
>03_05_0042 +
20180151-20180468,20181595-20181665,20182929-20183087,
20183598-20183664,20183913-20184008,20184687-20184733,
20185113-20185193,20185704-20185806,20185967-20186028,
20187188-20187302,20193191-20195087,20195206-20195492
Length = 1100
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +2
Query: 122 DFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRY 280
D P P++ SY+++ PS + L Q H+Q Y D ++Y
Sbjct: 284 DSFPPPFSKTSYRRLRGRGAATAIPSFKKIKCRGAQLIQIHLQGAYLMDPRKY 336
>02_04_0508 - 23550785-23551219,23551717-23552670
Length = 462
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 191 ACKLLSFVLLVGTKVPCTVWARNPSAAFW 105
ACK++ + + GT V +WA N W
Sbjct: 338 ACKVMGYDVPKGTTVFVNIWAINRDPKHW 366
>01_01_0494 +
3651813-3652094,3652692-3652844,3653810-3653924,
3654028-3654695
Length = 405
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 220 AGASHPGAHAVVIRQRRQEIP 282
A H A A +RQRR+EIP
Sbjct: 60 ATVGHSQAFAAAMRQRREEIP 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,613,557
Number of Sequences: 37544
Number of extensions: 202006
Number of successful extensions: 692
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -