Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32072
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 46 7e-06
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 0.47
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 0.47
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 29 0.82
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 29 0.82
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 1.4
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 26 4.4
U41038-2|AAX88827.1| 635|Caenorhabditis elegans Serotonin/octop... 26 4.4
U41038-1|AAK29709.2| 683|Caenorhabditis elegans Serotonin/octop... 26 4.4
AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin rec... 26 4.4
AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin rec... 26 4.4
U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical p... 26 5.8
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 26 5.8
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 26 5.8
AF016449-3|AAG23997.2| 337|Caenorhabditis elegans Serpentine re... 26 5.8
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 25 7.6
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 25 7.6
U64846-8|AAG24109.1| 331|Caenorhabditis elegans Serpentine rece... 25 7.6
U64846-6|AAG24115.3| 336|Caenorhabditis elegans Serpentine rece... 25 7.6
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 45.6 bits (103), Expect = 7e-06
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +2
Query: 158 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGG 298
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGG
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGG 47
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 0.47
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 30 NRRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRT 209
NRR+ S+ E+ + S+ + R K RR + + ++ ++ R +SRT
Sbjct: 225 NRRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRT 284
Query: 210 PIRSR 224
P RSR
Sbjct: 285 PQRSR 289
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.5 bits (63), Expect = 0.47
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 30 NRRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRT 209
NRR+ S+ E+ + S+ + R K RR + + ++ ++ R +SRT
Sbjct: 225 NRRSRSRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRSSSYSSRSRSRT 284
Query: 210 PIRSR 224
P RSR
Sbjct: 285 PQRSR 289
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 0.82
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 107 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 223
K+ P + P+ G YQQ++Q PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 28.7 bits (61), Expect = 0.82
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 159 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAISMCFSC*GD 22
W+ G + G+G + GG+LA L ++ S ++ V LL +S SC G+
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS-ATSCLGN 180
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 181 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 53
SFH L R+R R R R + RSDDV A S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 36 RNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 164
R S+ ++ + ++S R R K RRR DR+RD R K
Sbjct: 462 RRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504
>U41038-2|AAX88827.1| 635|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform b
protein.
Length = 635
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 TY-CNRLNRRNTSKWLIEEQNYASTSSERTARPKCRRRIS 128
TY C+R N+ T+ + ++ ++ SSER + R IS
Sbjct: 421 TYTCSRSNQERTTSVITRDETRSARSSERPEPSRARSEIS 460
>U41038-1|AAK29709.2| 683|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform a
protein.
Length = 683
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 TY-CNRLNRRNTSKWLIEEQNYASTSSERTARPKCRRRIS 128
TY C+R N+ T+ + ++ ++ SSER + R IS
Sbjct: 469 TYTCSRSNQERTTSVITRDETRSARSSERPEPSRARSEIS 508
>AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin
receptor protein.
Length = 635
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 TY-CNRLNRRNTSKWLIEEQNYASTSSERTARPKCRRRIS 128
TY C+R N+ T+ + ++ ++ SSER + R IS
Sbjct: 421 TYTCSRSNQERTTSVITRDETRSARSSERPEPSRARSEIS 460
>AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin
receptor protein.
Length = 683
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 12 TY-CNRLNRRNTSKWLIEEQNYASTSSERTARPKCRRRIS 128
TY C+R N+ T+ + ++ ++ SSER + R IS
Sbjct: 469 TYTCSRSNQERTTSVITRDETRSARSSERPEPSRARSEIS 508
>U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical
protein F46H5.2b protein.
Length = 362
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +2
Query: 29 QQEKHIEMANRGTKLCFDIVRTYSTAKMPPTD 124
++ + +EM++ GT++ D++R + A +P D
Sbjct: 324 EEMQDVEMSDNGTEVDDDLIRAATEAPLPDDD 355
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +2
Query: 29 QQEKHIEMANRGTKLCFDIVRTYSTAKMPPTD 124
++ + +EM++ GT++ D++R + A +P D
Sbjct: 415 EEMQDVEMSDNGTEVDDDLIRAATEAPLPDDD 446
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 190 HVNSFHLFYLLVRRSRVRSGHEIRRRHFGRAV 95
H+ H++Y+ +S ++G + R + RAV
Sbjct: 138 HLKQLHVYYMKAHKSAEQAGEGPKARRYKRAV 169
>AF016449-3|AAG23997.2| 337|Caenorhabditis elegans Serpentine
receptor, class t protein15 protein.
Length = 337
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 212 YKKPVLLTQGHMQWLYD-NDGK 274
+ KPV+ G+M W++D N GK
Sbjct: 184 FTKPVIYNTGYMTWVFDPNIGK 205
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 221 PVLLTQGHMQWLYDNDGKRYLD 286
P ++++ MQ+LYD ++LD
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLD 71
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 221 PVLLTQGHMQWLYDNDGKRYLD 286
P ++++ MQ+LYD ++LD
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLD 71
>U64846-8|AAG24109.1| 331|Caenorhabditis elegans Serpentine
receptor, class t protein19 protein.
Length = 331
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 218 KPVLLTQGHMQWLYD 262
KPV+ T HM W +D
Sbjct: 181 KPVIFTPTHMSWFFD 195
>U64846-6|AAG24115.3| 336|Caenorhabditis elegans Serpentine
receptor, class t protein20 protein.
Length = 336
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 218 KPVLLTQGHMQWLYD 262
KPV+ T HM W +D
Sbjct: 181 KPVIFTPTHMSWFFD 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,960,913
Number of Sequences: 27780
Number of extensions: 170394
Number of successful extensions: 555
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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