Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32070
         (472 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC045542-1|AAH45542.1|  702|Homo sapiens KIF3A protein protein.        30   3.5  
AM177178-1|CAJ45482.1|  725|Homo sapiens kinesin-like protein KI...    30   3.5  
AF041853-1|AAC72294.1|  702|Homo sapiens kinesin family member p...    30   3.5  
AB209780-1|BAD93017.1|  730|Homo sapiens Kinesin-like protein KI...    30   3.5  

>BC045542-1|AAH45542.1|  702|Homo sapiens KIF3A protein protein.
          Length = 702

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 441 LQQPHRTRVRWLFTTNVRLVLRKLFLHLTLI*NFLPR 331
           LQQ H+  +  L   N+R + R+L L + +I NF+PR
Sbjct: 566 LQQEHQREIEGLLE-NIRQLSRELRLQMLIIDNFIPR 601


>AM177178-1|CAJ45482.1|  725|Homo sapiens kinesin-like protein
           KIF3Abeta protein.
          Length = 725

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 441 LQQPHRTRVRWLFTTNVRLVLRKLFLHLTLI*NFLPR 331
           LQQ H+  +  L   N+R + R+L L + +I NF+PR
Sbjct: 589 LQQEHQREIEGLLE-NIRQLSRELRLQMLIIDNFIPR 624


>AF041853-1|AAC72294.1|  702|Homo sapiens kinesin family member
           protein KIF3A protein.
          Length = 702

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 441 LQQPHRTRVRWLFTTNVRLVLRKLFLHLTLI*NFLPR 331
           LQQ H+  +  L   N+R + R+L L + +I NF+PR
Sbjct: 566 LQQEHQREIEGLLE-NIRQLSRELRLQMLIIDNFIPR 601


>AB209780-1|BAD93017.1|  730|Homo sapiens Kinesin-like protein KIF3A
           variant protein.
          Length = 730

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 441 LQQPHRTRVRWLFTTNVRLVLRKLFLHLTLI*NFLPR 331
           LQQ H+  +  L   N+R + R+L L + +I NF+PR
Sbjct: 594 LQQEHQREIEGLLE-NIRQLSRELRLQMLIIDNFIPR 629


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,534,398
Number of Sequences: 237096
Number of extensions: 1165634
Number of successful extensions: 1939
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1939
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)