Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32070
         (472 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058351-1|AAL13580.1|  798|Drosophila melanogaster GH12381p pro...    28   5.5  
AE014297-3929|AAF56578.1|  798|Drosophila melanogaster CG12290-P...    28   5.5  
BT023149-1|AAY55565.1|   83|Drosophila melanogaster IP03510p pro...    27   9.7  

>AY058351-1|AAL13580.1|  798|Drosophila melanogaster GH12381p
           protein.
          Length = 798

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 236 PSVRPTSNCLCNVCLQIDYVCICLLVNTIFIGFP 135
           P +R T+N      L I+ +  C+L  T+F+G P
Sbjct: 29  PGLRTTANRFTINLLAINLIGCCILAPTLFLGLP 62


>AE014297-3929|AAF56578.1|  798|Drosophila melanogaster CG12290-PA
           protein.
          Length = 798

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 236 PSVRPTSNCLCNVCLQIDYVCICLLVNTIFIGFP 135
           P +R T+N      L I+ +  C+L  T+F+G P
Sbjct: 29  PGLRTTANRFTINLLAINLIGCCILAPTLFLGLP 62


>BT023149-1|AAY55565.1|   83|Drosophila melanogaster IP03510p
           protein.
          Length = 83

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -3

Query: 227 RPTSNCLCNVCLQIDYVCICLL-VNTIFIGFP 135
           R   NC   + +   YVC+C+L  + I  G P
Sbjct: 20  RVAGNCAAKLSISCSYVCVCILRTHCIVKGIP 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,960,533
Number of Sequences: 53049
Number of extensions: 356372
Number of successful extensions: 797
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)