Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32070
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical pr... 31 0.32
Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical pr... 31 0.32
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 29 1.7
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 29 1.7
U50312-5|AAA92322.1| 369|Caenorhabditis elegans Hypothetical pr... 28 2.9
AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical ... 28 2.9
Z81562-7|CAB04561.1| 367|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z92806-6|CAE17878.1| 268|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.32
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -3
Query: 236 PSVR-PTSNCLCNVCLQIDYVCI-CLLVNTIFI-GFPXXXXXXXNDYCKTML*LT*LNAC 66
P +R PT+ L N+ + V I C+L N I I GF CK L LT + C
Sbjct: 63 PMMRTPTNFFLSNLAIADLLVAIFCILQNMIHIVGFDHGNWPLGPVMCKLYLGLTNIMPC 122
Query: 65 LSRSFLMLLSSNKNFSI 15
S L+L+S K ++
Sbjct: 123 TSAGILVLVSLEKYIAV 139
>Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.32
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -3
Query: 236 PSVR-PTSNCLCNVCLQIDYVCI-CLLVNTIFI-GFPXXXXXXXNDYCKTML*LT*LNAC 66
P +R PT+ L N+ + V I C+L N I I GF CK L LT + C
Sbjct: 63 PMMRTPTNFFLSNLAIADLLVAIFCILQNMIHIVGFDHGNWPLGPVMCKLYLGLTNIMPC 122
Query: 65 LSRSFLMLLSSNKNFSI 15
S L+L+S K ++
Sbjct: 123 TSAGILVLVSLEKYIAV 139
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 329 SLGKKFHINVKCKNNLRKTRRTFVVNNQRT 418
SL +F V C NN ++ RT + N+QRT
Sbjct: 704 SLDHEFRETVSCVNNCLESARTALTNSQRT 733
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 329 SLGKKFHINVKCKNNLRKTRRTFVVNNQRT 418
SL +F V C NN ++ RT + N+QRT
Sbjct: 704 SLDHEFRETVSCVNNCLESARTALTNSQRT 733
>U50312-5|AAA92322.1| 369|Caenorhabditis elegans Hypothetical
protein B0222.5 protein.
Length = 369
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 314 SVKYFFRKSGYPTFWLWRRG*CSGHEPSVRPTSNCLCNVCLQIDYVC 174
S++Y+F + F +G C G++ S R +S C + LQ + C
Sbjct: 204 SIRYWFDVETFQCFPFEHKG-CGGNQNSYRTSSECYFDCVLQDYFSC 249
>AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical
protein C05C8.5 protein.
Length = 594
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -2
Query: 414 RWLFTTNVRLVLRKLFLHLTLI*NFLPRLKVTTFCKVFF*KEWLSDLLALASRMMFW 244
RW+ ++ R VL+ L + + + +F ++ F FF K+W+ ++ R +FW
Sbjct: 94 RWVSLSHHRNVLQNLVVRVNVDDDFFTTTNLS-FLSEFFEKQWIELDSDVSDRGLFW 149
>Z81562-7|CAB04561.1| 367|Caenorhabditis elegans Hypothetical
protein K03D7.11 protein.
Length = 367
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -1
Query: 373 IIFTFNVNMKFFA*TESNNFL*SIFLERVVIRPFGSGVEDDVLGTSRRSGRPRTVSVTFV 194
++ + VN + T++ L + L ++I PFG+ + TS R P T +TF
Sbjct: 143 LVMRYLVNGRINCWTDAKYGLKIVLLITLLILPFGASNYSKLSSTSVREWTPFTNCITFS 202
Query: 193 YKST 182
ST
Sbjct: 203 GNST 206
>Z92806-6|CAE17878.1| 268|Caenorhabditis elegans Hypothetical
protein K10G4.9 protein.
Length = 268
Score = 27.1 bits (57), Expect = 6.8
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -1
Query: 448 NTSSTASPNTGPLVVYNKCTPSFT*IIFTFNVNMKFFA*TESNNFL*SIFLERVVIRPFG 269
N S++ + T + V+ + + + VN++ T+S L + L + I PFG
Sbjct: 117 NVSASFTRLTEKISVWYAVAIAVIRTLMRYPVNVRINCLTQSTYGLRIVLLITLSIIPFG 176
Query: 268 SGVEDDVLGTSRRSGRPRTVSVTFVYKST 182
+ + TS R P T VTF ST
Sbjct: 177 ALSYFKLSSTSDRGWTPFTNCVTFSENST 205
>Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical
protein K03D3.14 protein.
Length = 281
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 187 STMYVYACW*TLFLLAFLVV 128
ST+Y Y W T+F++ F V+
Sbjct: 196 STLYTYIFWLTIFIVVFKVI 215
>Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical
protein K09A11.2 protein.
Length = 491
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 263 ARAKRSDNHSF*KNTLQKVVTFSLGKK 343
+R +SD +F K L+K + FS+GK+
Sbjct: 411 SRYLQSDGKTFDKAVLEKTIPFSIGKR 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,087,822
Number of Sequences: 27780
Number of extensions: 195709
Number of successful extensions: 493
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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