Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32060
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 120 2e-27
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 103 2e-22
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 103 2e-22
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 97 2e-20
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 95 9e-20
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 95 9e-20
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 94 2e-19
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 93 2e-19
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 93 2e-19
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 67 2e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 67 2e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 67 2e-11
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 67 2e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 2e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 55 7e-08
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 55 7e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 55 7e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 55 7e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 55 7e-08
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 55 9e-08
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 55 9e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 44 2e-04
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 1.3
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 5.3
BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p pro... 28 9.3
AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA... 28 9.3
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 120 bits (288), Expect = 2e-27
Identities = 62/165 (37%), Positives = 92/165 (55%)
Frame = +1
Query: 13 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 192
P+P KYLGV LD +TF H+ +R R + + Y ++ RSK+SL NK+T+YK
Sbjct: 738 PVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQ 797
Query: 193 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 372
+ P Y ++ A +HI +Q++Q++ RL G WFVRN LH DL L ++ +
Sbjct: 798 ILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEI 857
Query: 373 KSASERYFDKAMRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLT 507
S RY D+ RH NRL +A + S P +RR+PR ++T
Sbjct: 858 NKHSSRYHDRLERHRNRL-ASALNRSRPPRRL---NRRQPRDLIT 898
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 103 bits (247), Expect = 2e-22
Identities = 50/137 (36%), Positives = 81/137 (59%)
Frame = +1
Query: 16 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 195
IP A +V YLGV LD +T+R HI++ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 196 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMK 375
++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 376 SASERYFDKAMRHDNRL 426
+Y +K H N L
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 103 bits (247), Expect = 2e-22
Identities = 50/137 (36%), Positives = 81/137 (59%)
Frame = +1
Query: 16 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 195
IP A +V YLGV LD +T+R HI++ L+ +I RS +SL K LY +
Sbjct: 730 IPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSV 789
Query: 196 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMK 375
++P+ TY S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + +
Sbjct: 790 LKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIA 849
Query: 376 SASERYFDKAMRHDNRL 426
+Y +K H N L
Sbjct: 850 EKKTKYNEKLTTHTNPL 866
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 97.1 bits (231), Expect = 2e-20
Identities = 45/127 (35%), Positives = 77/127 (60%)
Frame = +1
Query: 13 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 192
P+P A +V YLGV LD +T+R HI++ + + L+ +I S +SL +KV LY +
Sbjct: 731 PLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNS 790
Query: 193 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYM 372
++P+ TY S ++ +A+ ++ID +Q QS+ R GAPW+VR+ ++ DL + S+ +
Sbjct: 791 ILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAI 850
Query: 373 KSASERY 393
E+Y
Sbjct: 851 TELKEKY 857
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 94.7 bits (225), Expect = 9e-20
Identities = 39/118 (33%), Positives = 70/118 (59%)
Frame = +1
Query: 13 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 192
PI W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT
Sbjct: 763 PIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKT 822
Query: 193 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++ +++
Sbjct: 823 IFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 94.7 bits (225), Expect = 9e-20
Identities = 39/118 (33%), Positives = 70/118 (59%)
Frame = +1
Query: 13 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 192
PI W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT
Sbjct: 711 PIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKT 770
Query: 193 CIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
P++ Y S V+ A+THI LQ Q++ +L + P++ LH G++ +++
Sbjct: 771 IFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 828
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 93.9 bits (223), Expect = 2e-19
Identities = 44/132 (33%), Positives = 76/132 (57%)
Frame = +1
Query: 31 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 210
+ KYLG+TLD +TF PH+K+ R + +L ++ ++S M+LR K +Y C+ P+
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIW 809
Query: 211 TYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASER 390
Y ++ AA+++ + +Q LQ+R R P++VR LH DL L ++ + + + R
Sbjct: 810 LYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSR 869
Query: 391 YFDKAMRHDNRL 426
Y D+ RH + L
Sbjct: 870 YSDRLRRHHSIL 881
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 93.5 bits (222), Expect = 2e-19
Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Frame = +1
Query: 37 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTY 216
KYLG+TLD +TF HI +++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 810
Query: 217 ASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYF 396
V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + + +++ +++Y
Sbjct: 811 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYM 870
Query: 397 DKAMRHDNRLIVAAADYS-PNPDHAGASHRRRPRH 498
++ H N L + N D RR RH
Sbjct: 871 ERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 905
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 93.5 bits (222), Expect = 2e-19
Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Frame = +1
Query: 37 KYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTY 216
KYLG+TLD +TF HI +++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 612
Query: 217 ASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYF 396
V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + + +++ +++Y
Sbjct: 613 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYL 672
Query: 397 DKAMRHDNRLIVAAADYS-PNPDHAGASHRRRPRH 498
++ H N L + N D RR RH
Sbjct: 673 ERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 707
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.3 bits (157), Expect = 2e-11
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Frame = +1
Query: 31 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 210
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 211 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASE 387
YA ++ + T +Q++++++ R + A + R D+ ++S + AS+
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 388 RYFDKAMRHDNRLI--VAAADYSPN 456
RY + H+N LI + Y PN
Sbjct: 927 RYANSLTDHENPLIYDLLINAYKPN 951
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.3 bits (157), Expect = 2e-11
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Frame = +1
Query: 31 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 210
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 211 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASE 387
YA ++ + T +Q++++++ R + A + R D+ ++S + AS+
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 388 RYFDKAMRHDNRLI--VAAADYSPN 456
RY + H+N LI + Y PN
Sbjct: 927 RYANSLTDHENPLIYDLLINAYKPN 951
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.3 bits (157), Expect = 2e-11
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Frame = +1
Query: 31 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 210
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 211 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASE 387
YA ++ + T +Q++++++ R + A + R D+ ++S + AS+
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 388 RYFDKAMRHDNRLI--VAAADYSPN 456
RY + H+N LI + Y PN
Sbjct: 927 RYANSLTDHENPLIYDLLINAYKPN 951
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 66.9 bits (156), Expect = 2e-11
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Frame = +1
Query: 31 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 210
K +YLG+ LD +TF H+ ++ + +L +I K S + K+ L+K + P+
Sbjct: 360 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 419
Query: 211 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASE 387
YA ++ + T +Q++++++ R + A + R D+ ++S + AS+
Sbjct: 420 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQ 479
Query: 388 RYFDKAMRHDNRLI--VAAADYSPN 456
RY + H+N LI + Y PN
Sbjct: 480 RYANSLTDHENPLIYDLLINAYKPN 504
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 60.1 bits (139), Expect = 2e-09
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGVTLD+ +T H+ + + + +L ++ RSK+ + K+ + K
Sbjct: 801 QTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILK 860
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + RN + D G++++ +
Sbjct: 861 SVLSPIWQYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEE 920
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + + Y PN
Sbjct: 921 FYQQAMHRFSETIKSHPNIAVRRILSRHYIPN 952
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 55.2 bits (127), Expect = 7e-08
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 673 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 732
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + +N + D ++++ +
Sbjct: 733 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 792
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + + Y PN
Sbjct: 793 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 824
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.2 bits (127), Expect = 7e-08
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + +N + D ++++ +
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + + Y PN
Sbjct: 909 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.2 bits (127), Expect = 7e-08
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + +N + D ++++ +
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + + Y PN
Sbjct: 909 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 55.2 bits (127), Expect = 7e-08
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 751 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 810
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + +N + D ++++ +
Sbjct: 811 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 870
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + + Y PN
Sbjct: 871 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 902
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.2 bits (127), Expect = 7e-08
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + +N + D ++++ +
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEE 908
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + + Y PN
Sbjct: 909 FYQQAVHRFSETTKSHPNVAVRRIFSRHYIPN 940
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 54.8 bits (126), Expect = 9e-08
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + N + D G++++ +
Sbjct: 64 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEE 123
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + Y PN
Sbjct: 124 FYQQALHRFSETIKSHPNIAVRRIFTRHYIPN 155
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 54.8 bits (126), Expect = 9e-08
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Frame = +1
Query: 10 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 189
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 789 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 848
Query: 190 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 366
+ + P+ YA + I +Q ++R R A + N + D G++++ +
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEE 908
Query: 367 YMKSASERYFDKAMRHDNRLI--VAAADYSPN 456
+ + A R+ + H N + + Y PN
Sbjct: 909 FYQQALHRFSETIKSHPNIAVRRIFTRHYIPN 940
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +1
Query: 16 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 195
+P+ R +YLG+T+ M F HI S+R R ++G L ++ S R + T+Y
Sbjct: 728 LPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGL 787
Query: 196 IRPVMTYASVVFAHAA 243
+ P + + + V+ A
Sbjct: 788 MAPCVLFGAPVWYDTA 803
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/97 (20%), Positives = 44/97 (45%)
Frame = +1
Query: 16 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 195
IP +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 196 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 306
I + Y ++ HA ++ ++ +++ + RLA+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 25 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 141
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p
protein.
Length = 828
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 122 PRINAARSRTDFICGRNVIDASRVTPRYLTFLAQGMG 12
P I A+RSR + VTP+YL LA G G
Sbjct: 165 PTIAASRSRRSIKPNPKYVSEDIVTPKYLAALADGGG 201
>AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA
protein.
Length = 943
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 122 PRINAARSRTDFICGRNVIDASRVTPRYLTFLAQGMG 12
P I A+RSR + VTP+YL LA G G
Sbjct: 165 PTIAASRSRRSIKPNPKYVSEDIVTPKYLAALADGGG 201
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,558,363
Number of Sequences: 53049
Number of extensions: 580449
Number of successful extensions: 1246
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -