Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32056
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1214 + 35470688-35471340,35471617-35471701,35471750-354719... 36 0.040
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 34 0.12
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560... 32 0.49
10_08_0029 + 14270945-14271364,14271449-14272486 30 1.5
07_03_0808 - 21668100-21669092 30 1.5
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 30 1.5
01_06_1834 + 40214378-40214563,40214728-40214818,40215006-402150... 30 2.0
10_08_0410 - 17716370-17716743,17716839-17716939,17717104-177173... 29 2.6
09_04_0434 - 17533633-17534637 29 2.6
08_01_1013 + 10251463-10251858,10252366-10252434,10252545-102526... 29 2.6
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 29 2.6
03_05_0358 - 23438416-23439282,23440116-23440163,23440343-234403... 29 2.6
02_05_0917 - 32714156-32714319,32714400-32714457,32714548-327146... 29 2.6
02_02_0668 + 12776945-12777478,12777801-12777824,12777863-12777913 29 2.6
04_03_0904 + 20717005-20718087 29 3.5
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 29 4.6
04_01_0244 - 3194141-3195091,3195301-3195312 29 4.6
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 28 6.0
09_01_0007 + 212984-213949 28 8.0
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 28 8.0
03_05_0571 - 25713519-25714064,25714673-25714804 28 8.0
03_04_0162 + 17858802-17861168 28 8.0
02_04_0191 - 20783143-20784365,20784453-20784597,20784977-207853... 28 8.0
02_01_0382 - 2772378-2773544 28 8.0
01_06_1327 + 36337578-36337976,36338068-36338397,36338523-363386... 28 8.0
01_06_1160 - 34996840-34996979,34997316-34997478,34997970-349983... 28 8.0
>01_06_1214 +
35470688-35471340,35471617-35471701,35471750-35471906,
35472086-35472189
Length = 332
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 APHVHGCTPVRRRGHQHHP-RLRGDRQPAPATNPDPEPSARTTLTQTDDVVP 155
+P G P+ R H HHP RL P P P+P RT+ D P
Sbjct: 13 SPPTTGLNPIHGRRHGHHPSRLLASSAPPPPPPRPPKPEPRTSHENLGDDTP 64
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 75 RQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSES---QDVTRTNSDDALSNSNLTVAED 245
++ A PD +R L+QT++++ + +S S QD DD + + E
Sbjct: 464 KEEVQAPFPDVSKVSRDVLSQTENILGALMLLSRSLSPQDKESVMVDDGSNKEDSVKEEQ 523
Query: 246 CANDEQENELDRVKS 290
CA+D +N+ D V +
Sbjct: 524 CASDYTDNDDDAVST 538
>01_07_0014 -
40455673-40455723,40455815-40455892,40455987-40456049,
40456250-40456390,40456851-40456949,40457403-40457477,
40457556-40457652,40457738-40457805,40458456-40458512,
40458613-40458671,40458798-40458921,40459208-40459264,
40459378-40459457,40459585-40459793,40459868-40459986
Length = 458
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +3
Query: 81 PAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSNLTVAEDCANDE 260
P A P + T + D+ + + +E ++DD N N+ V D A DE
Sbjct: 9 PRGAAKLVPVEAEPPTQEEIDEAIKAIAQHTEGGSDADEDADDGEENGNMEV--DAAADE 66
Query: 261 QENELDRV 284
+E E+D V
Sbjct: 67 EEEEVDEV 74
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 8 PRPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPRAV 115
PR R P Q P PP F+ +PS R R PR+V
Sbjct: 374 PRQRTEPHLPQPPPPPPHFERQPSRR-RGGGVPRSV 408
>07_03_0808 - 21668100-21669092
Length = 330
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 27 PVRRRGHQHHPRLRG-DRQPAPATNPDPEPSA 119
P R RGHQH P LR AP P P SA
Sbjct: 142 PRRARGHQHQPALRHLPPSTAPRRTPPPPGSA 173
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/87 (27%), Positives = 33/87 (37%)
Frame = +3
Query: 24 TPVRRRGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNS 203
TP R R PR R R A P P P R D P + + +E+ RTN
Sbjct: 12 TPRRHRHGPATPRRRRRRHAAAVATPPPPPPRRRANRCPDAATPPLTNENEND---RTNE 68
Query: 204 DDALSNSNLTVAEDCANDEQENELDRV 284
+ N +E+ + EN+ V
Sbjct: 69 SEN-ENDRTKTSENEGTNVNENKRTNV 94
>01_06_1834 +
40214378-40214563,40214728-40214818,40215006-40215093,
40215444-40215695,40215927-40216101,40216243-40216329,
40216445-40216513,40216638-40216734,40217010-40217092,
40217373-40217480,40217672-40217793,40217921-40218028,
40218121-40218194,40218492-40218617,40219655-40219722,
40219930-40220079,40220164-40220214,40220678-40220734,
40220824-40220970,40221064-40221155,40221516-40221625,
40221728-40221791,40221883-40222032,40222554-40222788
Length = 929
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 486 FFAACFLFRPRPRYIH*YIEVLQVLQFQGHHR 391
F+ CF+F P Y + ++ LQFQG H+
Sbjct: 74 FYKGCFMFEPHSGYD--WFVIVDCLQFQGDHK 103
>10_08_0410 -
17716370-17716743,17716839-17716939,17717104-17717300,
17717392-17717677,17717768-17718004,17718226-17718281,
17720042-17721226
Length = 811
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 45 HQHHPRLRGDRQPAPATNPDPEPSARTTLT-QTDDVVPCVNSVSESQDVTR 194
H HH L A A P P P A T LT Q ++ VP + V + DV R
Sbjct: 17 HHHHAHLPALPHLA-APPPPPPPPAETELTEQREEEVPVDDVVEAAADVPR 66
>09_04_0434 - 17533633-17534637
Length = 334
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 39 RGHQHHPRLRGDRQPAPATNPDPEPSARTTLTQTDDVVPC 158
RGHQH P ++P P P SA ++ V PC
Sbjct: 267 RGHQHKPE---PQEPRQLRRPPPHLSAAAAVSAAQPVEPC 303
>08_01_1013 +
10251463-10251858,10252366-10252434,10252545-10252652,
10253261-10253326,10254258-10254395,10255047-10255094,
10256292-10256398,10257228-10257302,10258317-10258368,
10258485-10259068,10259944-10260150,10260236-10260407
Length = 673
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Frame = +3
Query: 60 RLRGDRQPAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSD----DALSNSN 227
R R + P P PEP A + + DD +P + D D + S
Sbjct: 36 RFRPRAKGKPKPKPKPEPKAEDSKLKADDSIPMSKPEEPKPEAAAPMEDSMEVDGVGPSA 95
Query: 228 LTVAEDCANDEQENELDRV 284
AE +E E+E D V
Sbjct: 96 SASAEGVGAEEVEDEEDYV 114
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 60 RLRGDRQPAPATNPDPEPSARTTLTQTD 143
R R + P P T+ DP+PS T TQ D
Sbjct: 103 RYRDRKPPPPPTHRDPKPSLPPTTTQRD 130
>03_05_0358 -
23438416-23439282,23440116-23440163,23440343-23440382,
23440459-23440610
Length = 368
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 156 KAQHRLFELRSFAQTARGR-DSWRGRVDGRPLNAGGVGAPCAARGCNRG 13
+A+HRL E + RG DS GR+ R GGVG ARG G
Sbjct: 206 RARHRLVEGSETSLAQRGTADSSGGRLGARGAG-GGVGGRLGARGATDG 253
>02_05_0917 -
32714156-32714319,32714400-32714457,32714548-32714618,
32715280-32715403,32715511-32715582,32715675-32715950
Length = 254
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 41 GAPTPPAFKGRPSTRPRHESRPRAVCAND 127
GAPTPP FK P R + + R R V A +
Sbjct: 8 GAPTPPRFKRSPH-RKKRQPRTRRVAAGE 35
>02_02_0668 + 12776945-12777478,12777801-12777824,12777863-12777913
Length = 202
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 17 RLHPRAAQGAPTPPAFKGRPSTRPRHESRPRAV 115
R P +G P PP F R RP S+P A+
Sbjct: 4 RRQPEPTRGTPKPPLFVVRGDRRPPLRSKPEAL 36
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 8 PRPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPR 109
P+P+ P PTPP++K +P P +P+
Sbjct: 200 PQPKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQ 233
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 8 PRPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPR 109
P+P+ P PTPP +K +P P +P+
Sbjct: 128 PQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKPQ 161
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 147 VVPCVNSVSESQDVTRTNSDDALSNS 224
V PC++ +SE+ DV R + D+L NS
Sbjct: 543 VHPCLSEISEANDVDRDDRVDSLVNS 568
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 8 PRPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPRAVCANDLNSNRR 145
PR P A P PPA P+ P H S P + + L S R
Sbjct: 209 PRNPPPPAAPAAPPVPPAVPAAPAPAPVHMSAPASALSFALASAAR 254
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1
Query: 117 QTARGRDSWRGRVDGRPLNAGGVGAPCAARGCNRGRG 7
+ RGR RGR GR G V RG RGRG
Sbjct: 40 ERGRGRGRGRGRGRGRGRRGGAVRGRGRGRGRCRGRG 76
>09_01_0007 + 212984-213949
Length = 321
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 HVHGCTPVRRRGHQHHPRLRG-DRQPAPATNPDPEPSARTTLTQTDDVV--PCVNSVSES 179
H++ P RRR HQHH L R+ P P+ A + D P V S +S
Sbjct: 89 HIYKPPPARRRPHQHHTTLFDLSRKVWPQFQHPPQAQAVHISSHGADSASGPIVISSDDS 148
Query: 180 Q-DVTRTNSDDALSNSNLTVAEDCAN 254
+ +++D A ++S+ V +N
Sbjct: 149 SGHIVISSNDGAGADSDAMVVSLSSN 174
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 8 PRPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPRAV 115
P P P + APTPP + RP + P + +PR V
Sbjct: 60 PSPTPPPASPPPAPTPP--QTRPPSPPPQQQQPRPV 93
>03_05_0571 - 25713519-25714064,25714673-25714804
Length = 225
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 1 PHPTSTVAPPCGAGGTNTT 57
P P+ST A GAGGT TT
Sbjct: 77 PCPSSTAAAASGAGGTTTT 95
>03_04_0162 + 17858802-17861168
Length = 788
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 62 TRVVLVPPAPHGGATVDVG 6
T +VLV P PHG AT D G
Sbjct: 55 TYIVLVDPPPHGAATDDDG 73
>02_04_0191 -
20783143-20784365,20784453-20784597,20784977-20785345,
20786164-20786250,20786405-20786603,20786733-20786818
Length = 702
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 8 PRPRLHPRAAQGAPTPPAFKGRPSTRPRHESRPRAVCANDLN 133
P P+LH AQ AP PP S + R+ S+ + + +N
Sbjct: 342 PPPQLHQAPAQSAPPPPKV-SNASNKSRNNSKKQVAQSIPVN 382
>02_01_0382 - 2772378-2773544
Length = 388
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 5 TPRPRLHPRAAQG-APTPPAFKGRPSTRPRHESRPRA 112
+P P PR+A G APT P S R H+ PRA
Sbjct: 14 SPSPSRLPRSASGKAPTSPPSSSNASRR-HHQQPPRA 49
>01_06_1327 +
36337578-36337976,36338068-36338397,36338523-36338628,
36338722-36339104
Length = 405
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 81 PAPATNPDPEPSARTTLTQTDDVVPCVNSVSESQDVTRTNSDDALSNSNLTVAEDCAND 257
PAPA P PS+ + V +S+++ + SD A+ + L +A A++
Sbjct: 335 PAPAARPSGVPSSAEAAETENGGAASVKGISKAESSDKACSDAAMLLTKLALARRSADN 393
>01_06_1160 -
34996840-34996979,34997316-34997478,34997970-34998388,
34998413-34998620
Length = 309
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 156 KAQHRLFELRSFAQTARGRDSWRGRVDGRPLNAGGVGAPCA-ARGCNRGRGVR 1
+A R LRS GR + R + P GG AP A ARG GRG +
Sbjct: 112 RAVSRTLGLRSARPAPCGRGATAARANSSPYG-GGRSAPAAGARGRGGGRGTQ 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,935,513
Number of Sequences: 37544
Number of extensions: 374842
Number of successful extensions: 2278
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2215
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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