Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32053
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.5  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   3.5  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   6.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   6.1  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -1

Query: 163 NTFNSIRKTLELFSLLYQNVYNLSNFLHNPILSLFKFNK-IYRA 35
           N  +S+RK LE F    +   +++N  + P++  F  +K IY A
Sbjct: 507 NGRDSVRKVLESFLQRGREYADIANAYYGPVIENFNCDKSIYTA 550


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 170 VACITLQLTIRTLKNKQVTRRDI 238
           V CIT +   R  +N Q+TR D+
Sbjct: 127 VVCITWEPPTREHRNGQITRYDV 149


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 405 LSNILGTHRKVYLF 364
           L+N+L T+RKVY F
Sbjct: 306 LNNLLSTNRKVYEF 319


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 405 LSNILGTHRKVYLF 364
           L+N+L T+RKVY F
Sbjct: 306 LNNLLSTNRKVYEF 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,968
Number of Sequences: 2352
Number of extensions: 5394
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)