Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32041
(500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67738-2|CAA91546.2| 482|Caenorhabditis elegans Hypothetical pr... 31 0.47
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 31 0.62
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 30 1.1
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 1.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 1.4
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 29 1.4
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 29 2.5
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 27 5.8
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 27 5.8
Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z67738-2|CAA91546.2| 482|Caenorhabditis elegans Hypothetical
protein W03G11.3 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.47
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = +3
Query: 240 HRYTIIAWPLRVSWRWN---VGPQRNI 311
H WP R SW WN +GP+R+I
Sbjct: 120 HHEGFTMWPSRTSWNWNSMDIGPKRDI 146
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 30.7 bits (66), Expect = 0.62
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -1
Query: 404 GATLLQYRRLTHCR*ICRPCGP*AFRRRKASDVPLRAHVPSPRNSEWPRDDGVPVNPPG 228
G Q+ L+ C IC P GP + P A V P ++ P+ +P+ PG
Sbjct: 1321 GGNTNQFETLSECERICTPSGP---KTPTLPPTPTPATVAVPVPAQTPKVPQLPIGAPG 1376
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 223 TRPGGFTGTPSSRGHSEFLGDGTWARSGTSDAFRR 327
T+PG F G P RG G G +AR G + A R
Sbjct: 331 TQPGSFRGAP--RGRGNIRGRGGFARGGFTGAINR 363
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 161 QTMKRDQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRTPSVAEK 334
+++K ++S + F E +QD +DSP+H + F + P EK
Sbjct: 3946 ESLKSPKESGEAFSQFTSEKEQDRSDSPIHSQKEDISQFQNESSPEDVKSEQPHDEEK 4003
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 161 QTMKRDQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRTPSVAEK 334
+++K ++S + F E +QD +DSP+H + F + P EK
Sbjct: 3946 ESLKSPKESGEAFSQFTSEKEQDRSDSPIHSQKEDISQFQNESSPEDVKSEQPHDEEK 4003
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 170 KRDQDSTDDFEHLDRETKQDPADS----PVHHHRVATQSFLEMERGPAAEHRTPSVAEKL 337
K ++D D+ E + E D D V H A+ S P A+H ++ E
Sbjct: 277 KEEEDHEDEREEQEEEDSSDEEDGLDDDDVRRHIPASTS------APVAKHPEAAMPEPA 330
Query: 338 MDHMADKFTDSESDADTVGESPLHRPEPRV 427
+H + + +++++ + G P+H E +
Sbjct: 331 AEHSSIQSSEAQALGEISGAHPIHIGESEI 360
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 248 HHHRVATQSFLEMERGPAAEHRTPSVAEKLMDHMADKFTDSESDADTVGESPLHRPE 418
H+ ++ ++S + +E+GP SV ++ +A K +SD+DT E PL E
Sbjct: 256 HNEKLVSESAMPIEKGPTRPAAMASVIGEMKKKVAAKAKLLDSDSDTDRE-PLGSSE 311
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 311 DVPLRAHVPSPRNSEWPRDDGVPVNPPGLV 222
D+ +R VP P+ E R VP NPP L+
Sbjct: 462 DLTIRVVVP-PKRREGKRKSEVPANPPALL 490
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 311 DVPLRAHVPSPRNSEWPRDDGVPVNPPGLV 222
D+ +R VP P+ E R VP NPP L+
Sbjct: 503 DLTIRVVVP-PKRREGKRKSEVPANPPALL 531
>Z73906-7|CAA98119.2| 428|Caenorhabditis elegans Hypothetical
protein D2030.7 protein.
Length = 428
Score = 27.1 bits (57), Expect = 7.6
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Frame = +2
Query: 167 MKRDQDSTDDFEHLD--------RETKQDPADSPVHHHRVATQSFLEMERGPAAEHRTPS 322
+K+++++T+D HL+ R+ K +P PV + S + E G + +
Sbjct: 216 IKQEENTTEDTVHLEKVIPEDSVRDVKDEPISEPVEQE--TSSSSISKELGDSGSSKFSD 273
Query: 323 VAEKLMDHMADKFTDSESDADTVGESPLHR--PEPR 424
VA+ +H A S TV S + + P PR
Sbjct: 274 VAD---NHTASLNLSMLSQRSTVTSSSISQSIPTPR 306
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,751,748
Number of Sequences: 27780
Number of extensions: 219811
Number of successful extensions: 769
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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