Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32038
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70211-4|CAA94159.1|  825|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AC024857-3|AAK31568.6|  611|Caenorhabditis elegans Hypothetical ...    30   1.5  
U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC006804-4|ABO16464.1|  369|Caenorhabditis elegans Hypothetical ...    29   4.7  
AC006804-3|AAF60757.2|  388|Caenorhabditis elegans Hypothetical ...    29   4.7  

>Z70211-4|CAA94159.1|  825|Caenorhabditis elegans Hypothetical
           protein K11E4.4 protein.
          Length = 825

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -2

Query: 338 RILTLFLKMFHKNDCIDVP*LL*KKCHLKSDYNTTCDIVFSH*NCIISKLTNFTGECFKG 159
           +IL + L +F     +D+  +  ++ +L   Y   CD+VF   +C I +    T  CF G
Sbjct: 59  KILMILLTIFILIFSLDIVYVCTRQIYLAFSYENDCDLVFETASCSIFRRIALT--CFVG 116

Query: 158 LTCDIF 141
           +T   F
Sbjct: 117 VTTTQF 122


>AC024857-3|AAK31568.6|  611|Caenorhabditis elegans Hypothetical
           protein Y71G12A.2 protein.
          Length = 611

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -3

Query: 742 IFNIIYKTFSYTQSSSSKC 686
           ++NI YK F+Y +SS+SKC
Sbjct: 513 VWNITYKLFNYLRSSNSKC 531


>U23510-3|AAC46782.1|  340|Caenorhabditis elegans Hypothetical
           protein R12C12.3 protein.
          Length = 340

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 413 YYCYQLRTW*FIKKIFIYLLGSMVFFFKY 499
           Y  Y+L++W ++  IFI LLG+   F  Y
Sbjct: 4   YEFYELKSWMYLPVIFIGLLGNFASFLVY 32


>AC006804-4|ABO16464.1|  369|Caenorhabditis elegans Hypothetical
           protein Y53G8B.4b protein.
          Length = 369

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = -2

Query: 149 DIFNINHLCNIYFLFFTSYII 87
           DIFN + +  IY++FFT+++I
Sbjct: 260 DIFNTSMVTPIYYVFFTTFVI 280


>AC006804-3|AAF60757.2|  388|Caenorhabditis elegans Hypothetical
           protein Y53G8B.4 protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = -2

Query: 149 DIFNINHLCNIYFLFFTSYII 87
           DIFN + +  IY++FFT+++I
Sbjct: 279 DIFNTSMVTPIYYVFFTTFVI 299


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,712,072
Number of Sequences: 27780
Number of extensions: 301755
Number of successful extensions: 574
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)