Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32030
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    28   0.30 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.40 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.40 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    26   0.92 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.7  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.5  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -2

Query: 395 EAPGRSSDFTRNDDPG*TGYEQVTKSPEGCHETQHGPTFL 276
           EA     D T  D    TGY    KS + CH  QH P FL
Sbjct: 64  EATNTCGDETDTDFCVQTGYSN-RKSCDVCHAGQHSPQFL 102


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 530 IPQHLSHEHRPQQRRVPSETDP 595
           +P H  H+H PQQ+  P  + P
Sbjct: 103 LPHHPHHQHHPQQQPSPQTSPP 124


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 530 IPQHLSHEHRPQQRRVPSETDP 595
           +P H  H+H PQQ+  P  + P
Sbjct: 103 LPHHPHHQHHPQQQPSPQTSPP 124


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 397 CTILGGYFCWLCHCLHSWWRLYCSFCRNHRNS*SRR 504
           C   G Y C  C C   W    C  C N +NS +RR
Sbjct: 481 CNFNGDYVCGQCQCYVGWIGKTCE-C-NLQNSQNRR 514



 Score = 25.4 bits (53), Expect = 1.6
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +2

Query: 122 HSHLHSERARHRRLLLQSELRALHVLPLRERCRLGRVGTCDLVVFRGIPAE 274
           +S L  E+    R     +L A+ ++P +   RLG++G+   + F+  PA+
Sbjct: 86  YSFLQIEKNEPHRDFDSQQLEAVQIMPQKMNLRLGKLGS-RTISFKYKPAK 135


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +3

Query: 555 TGRSKDEYPVKQILVDDLVHAKPEKQ 632
           +G+S   Y ++ +L D+  H +PE++
Sbjct: 36  SGKSNFFYAIQFVLSDEFTHLRPEQR 61


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 515  RRSRSIPQHLSHEHRPQQRRVPSETD 592
            RR +  PQ    +H PQQ+ V   +D
Sbjct: 1110 RREQVRPQRRIRQHMPQQKEVVELSD 1135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,631
Number of Sequences: 2352
Number of extensions: 14331
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)