Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32024
         (380 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p pro...    27   8.2  
AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA...    27   8.2  

>AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p
           protein.
          Length = 361

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 27  ALLYIIRTLFLKRPNALCKAYLLNIEKYI*HSYCHFSFQCSFPIYI 164
           A + I+ + FLK  N++ K +   +E       C+F F  S PIY+
Sbjct: 286 AAIGIVTSFFLKYMNSILKTFASALELLFTAVLCYFLF--SIPIYM 329


>AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA
           protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 27  ALLYIIRTLFLKRPNALCKAYLLNIEKYI*HSYCHFSFQCSFPIYI 164
           A + I+ + FLK  N++ K +   +E       C+F F  S PIY+
Sbjct: 286 AAIGIVTSFFLKYMNSILKTFASALELLFTAVLCYFLF--SIPIYM 329


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,201,303
Number of Sequences: 53049
Number of extensions: 250642
Number of successful extensions: 643
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)