Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32021
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78540-2|CAB01737.1|  900|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF016665-5|ABP57825.1|  649|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z78540-2|CAB01737.1|  900|Caenorhabditis elegans Hypothetical
           protein C33G3.4 protein.
          Length = 900

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 479 FFSPVETD*GIRTNSLYYHRFLNTSTN 559
           +FS V     ++T +L+Y RF NT+TN
Sbjct: 639 YFSQVHQSIALKTQTLHYRRFRNTTTN 665


>AF016665-5|ABP57825.1|  649|Caenorhabditis elegans Hypothetical
           protein C49D10.4 protein.
          Length = 649

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 140 LLY*CSLLINKINTQTCTELTKLNNYFDRTHTVRLLSLSLLNSIFQ 3
           L+Y   +L N   T+   + TKL  YFD  H +   + +L+  +FQ
Sbjct: 597 LIYISDVLYNGNKTKNFDDTTKLGYYFDGFH-ITPFARNLIKPVFQ 641


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,188,723
Number of Sequences: 27780
Number of extensions: 296162
Number of successful extensions: 544
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)