Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32020
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 144 2e-35
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 68 3e-12
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 68 3e-12
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 57 6e-09
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 57 6e-09
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 43 1e-04
Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 27 6.0
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 27 6.0
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 27 7.9
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 144 bits (350), Expect = 2e-35
Identities = 65/119 (54%), Positives = 88/119 (73%)
Frame = +1
Query: 154 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 333
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60
Query: 334 NAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 510
NAAL +Q LWHTT++Y IYEY E+L +K P LN V+ VNSGSEAN+LA LA+
Sbjct: 61 NAALTEQAQKLWHTTSIYHTEPIYEYAEKLLSKFPSKLNSVFFVNSGSEANDLALALAR 119
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 68.1 bits (159), Expect = 3e-12
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 393
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 394 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 510
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLAR 143
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 68.1 bits (159), Expect = 3e-12
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRH 393
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL T N+ +
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVS 105
Query: 394 PKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 510
++ + EQ+ + LPG L+ V NSGSEAN+LA LA+
Sbjct: 106 TQLTDCAEQILSTLPG-LDTVLFCNSGSEANDLALRLAR 143
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 57.2 bits (132), Expect = 6e-09
Identities = 33/98 (33%), Positives = 54/98 (55%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 396
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 397 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 510
+ EY E+ KL + V +N+G EA E A LA+
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLAR 135
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 57.2 bits (132), Expect = 6e-09
Identities = 33/98 (33%), Positives = 54/98 (55%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 396
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ + +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 397 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 510
+ EY E+ KL + V +N+G EA E A LA+
Sbjct: 100 VLGEY-EEYVTKL-FKYDKVLPMNTGVEACESAVKLAR 135
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 217 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 381
PV L++G +++D +GK+Y D V+ GHCHPK+ LKD V+ N
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91
>Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical
protein T26F2.3 protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +1
Query: 238 HMQWLYDNDGKRYLDLF-GGIVTVSVGH-----C---HPKVNAALKDQLDVLWHTTNLYR 390
H +WL+ N K Y F G + T+ +G C K+ + ++DV W N
Sbjct: 205 HGKWLHWNSQKHYFQSFLGNVPTILIGRKDQNDCVYQVDKIKTSEIPKMDVKWKVQNCL- 263
Query: 391 HPKIYEYVEQLAAKLPGD 444
+++ + ++ +KLP D
Sbjct: 264 -AQLFTVLNKIMSKLPDD 280
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 103 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 219
K+ P + P+ G YQQ++Q PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 177 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 49
SFH L R+R R R R + RSDDV A S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 26 QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 160
++R S+ ++ + ++S R R K RRR DR+RD R K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 155 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 42
W+ G + G+G + GG+LA L ++ S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 328 KVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAK 432
K ++ +D++ V W T + R P IY+ + L K
Sbjct: 343 KPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPK 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,415,670
Number of Sequences: 27780
Number of extensions: 310885
Number of successful extensions: 944
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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