Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32014
         (759 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K072 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_A4VDP5 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_Q8I389 Cluster: Putative uncharacterized protein PFI029...    33   5.8  

>UniRef50_A5K072 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 2027

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = +1

Query: 544 KRQKTCNK*DTLKYF--NYNYGPIMFTN-VFMHFPIKYMYFEHGFSNYLKYLNIMIISIS 714
           KR +  N+     YF  NYN      TN +F+ F    +Y +H F +YL Y  + II+I 
Sbjct: 562 KRIRCINRVKKFFYFFINYNMKSSKSTNNLFLFFRGVSLYVKHRFMHYLSYEPVWIIAIL 621

Query: 715 TRI 723
            RI
Sbjct: 622 IRI 624


>UniRef50_A4VDP5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 216

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 12/47 (25%), Positives = 30/47 (63%)
 Frame = +1

Query: 577 LKYFNYNYGPIMFTNVFMHFPIKYMYFEHGFSNYLKYLNIMIISIST 717
           +KYF+++ G I+FT   + F ++++ F++ F    +Y  + ++ ++T
Sbjct: 21  IKYFSFSLGKILFTKFLLFFCLEFLVFQYYFGE-SEYTRLYLLVLNT 66


>UniRef50_Q8I389 Cluster: Putative uncharacterized protein PFI0295c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFI0295c - Plasmodium falciparum (isolate 3D7)
          Length = 1807

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = -1

Query: 444  FFSLYLYILIHVRASVLKATDTAEVQQPTK*GMPLAKRLSNISNNIRLNTTFVSCHSRNF 265
            F  L +Y++ H+  S+L     +   +  K    +   + NISN   +     + + +N 
Sbjct: 949  FILLLIYMVFHMLPSILSEEICSLNTKGEKLAFSIFFYVDNISNPYNITQMEYAGYEKNP 1008

Query: 264  LVLNVKKNAMRKFHKLNY 211
             ++ +KK  +R  +KLNY
Sbjct: 1009 HLIEIKKTLIRSKYKLNY 1026


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,292,341
Number of Sequences: 1657284
Number of extensions: 11892267
Number of successful extensions: 26666
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26657
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)