Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32014
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    27   0.12 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.1  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 557 VFCLFYFTL*CNIISLFFYSILTDSTYYTNIL-LQNHCD 444
           VF L YF L    IS+ + ++ TD+ +YT ++ ++  C+
Sbjct: 163 VFDLVYFILAFACISIAYTNVSTDAFFYTCLIQIETQCE 201



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 589 NYNYGPIMFTNVFMHFPIKYMYFEHGFSNYLKYLNIM 699
           N+ Y P M T      P+KY  F+  F+N +   +++
Sbjct: 64  NFYYLPAMSTG-----PLKYAIFQKNFTNIVNLTHLL 95


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 527 CNIISLFFYSILTDSTYYTNI 465
           CN I LF+ S+     YY ++
Sbjct: 322 CNFIILFYLSVFVILVYYASL 342


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 487 ILHTTLIYYYRITAILLFVF 428
           I+ T LI +Y+ TAIL   F
Sbjct: 65  IVPTKLISFYKSTAILEIAF 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,398
Number of Sequences: 336
Number of extensions: 3493
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)