Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32014
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical pr...    31   0.89 
AL031627-21|CAA20970.1|  326|Caenorhabditis elegans Hypothetical...    29   2.7  
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ...    29   4.7  

>Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical
           protein F43A11.4 protein.
          Length = 323

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = -3

Query: 586 SI*AYLIYCKFFVF---FILLYNVI*YHXXXXXX*PILHTTLIYYYRITAILLFVFIHLD 416
           S+ A L YC F +    F  +Y  + Y          + TTLI+ YRI  I++ +  ++ 
Sbjct: 94  SLYAGLQYCGFLIAINRFCAMYIPMFYSTLFGVKITFILTTLIFVYRIVKIIMELIHYI- 152

Query: 415 PRPSKCFKSY 386
             P +CF S+
Sbjct: 153 --PLQCFSSF 160


>AL031627-21|CAA20970.1|  326|Caenorhabditis elegans Hypothetical
           protein Y102A5C.33 protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 631 HFPIKYMYFEHGFSNYLKYLNIMII 705
           HFP  ++Y ++  SNY++ LN+  +
Sbjct: 134 HFPYDFLYSQNYISNYVRKLNVFFV 158


>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y42A5A.1 protein.
          Length = 1045

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 598 YGPIMFTNVFMHFPIKYMYFEHGFSNYLKYLNIMI 702
           Y P    + ++ F +  MY   G+S Y KYL +++
Sbjct: 760 YRPFQTFSAYLDFFLPRMYIHEGWSIYKKYLELVV 794


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,441,931
Number of Sequences: 27780
Number of extensions: 302969
Number of successful extensions: 783
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)