Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32013
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.7  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 576 PTTRRCPCTSWSRTRTCPSASTTKRYTTS 662
           PT    P   W+R  + PSA  +K   T+
Sbjct: 402 PTISTTPRPEWARPPSTPSADGSKPVQTT 430


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 371 DSVLDVIRKEAESCDCLQGF 430
           D V    RK AE C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 537 LYPRLRLARSSWSPTTRRCPCTSW 608
           + PR++   + W+P T   P   W
Sbjct: 521 IMPRIQAEVNIWNPLTDTIPIHVW 544


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,363
Number of Sequences: 336
Number of extensions: 2968
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)