Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32012
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 278  TTGRRLIDEICQIAAYTPKQTYSQ-YIMPYGDLNP 379
            TT  +LID+ C    Y P ++ S  Y+   G L P
Sbjct: 1197 TTVSQLIDDKCDSGQYYPHESCSSFYVCVNGHLVP 1231


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 545 IYHEPRRFSPTMLLXALTRYD 607
           +Y++PR  SP +    L  +D
Sbjct: 227 VYYDPRALSPNLEFVVLEAFD 247


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 476 EISALTDFLDWLEKEKGD 529
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 476 EISALTDFLDWLEKEKGD 529
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 476 EISALTDFLDWLEKEKGD 529
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 476 EISALTDFLDWLEKEKGD 529
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 251 TFLVGDRLASQPVREALQYSLPF 183
           T LV  RL ++PV +A     PF
Sbjct: 510 TSLVRGRLVAKPVADARDAPAPF 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,989
Number of Sequences: 336
Number of extensions: 3637
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)