Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32011
         (311 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   0.32 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   3.0  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    19   9.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    19   9.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    19   9.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    19   9.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    19   9.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    19   9.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           19   9.2  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    19   9.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    19   9.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 0.32
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 275 RVLMYARKKLYFIFIKFISFFLN 207
           R  ++   +L+F+ + +ISFFLN
Sbjct: 129 RTQIFITCELFFVILLWISFFLN 151


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 284 KRVRVLMYARKKLYFIFIKFISFFLNIK 201
           K +R+L     ++Y +  K + F+ NI+
Sbjct: 313 KPIRILFDVSSEIYNVEYKNVEFWRNIR 340


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 303 FIDSYLKKGACT 268
           ++D  L+KG CT
Sbjct: 42  YLDCILEKGKCT 53


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 118 YYKMNANNTFFYEC 77
           YY  NAN+T+   C
Sbjct: 29  YYNPNANSTYPPAC 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,005
Number of Sequences: 336
Number of extensions: 718
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)