Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32008
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   7.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 545 VIKTGLGLN*RPRRHNNTQELSKIVSFLDELHL 643
           +++T +G++   R HN  +    ++   D LHL
Sbjct: 190 LLETAMGVSKPTRDHNAFEYAMAVMKMCDILHL 222


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 371 IRYHLLGEFIFVS*ILFTP 315
           + Y LL  F+F +  LFTP
Sbjct: 48  LEYFLLSAFLFGANALFTP 66


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 220 WNKTFFNNYIKNTFLF 173
           WN T  N Y K+ F++
Sbjct: 661 WNFTIPNMYFKDVFIY 676


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 220 WNKTFFNNYIKNTFLF 173
           WN T  N Y K+ F++
Sbjct: 661 WNFTIPNMYFKDVFIY 676


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,193
Number of Sequences: 438
Number of extensions: 4574
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)