Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32004
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   5.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.7  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 565 TKVSIYPPKFHVTPFG 612
           T V + PPK + TP+G
Sbjct: 79  TTVRVRPPKVYPTPYG 94


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 565 TKVSIYPPKFHVTPFG 612
           T V + PPK + TP+G
Sbjct: 393 TTVRVRPPKVYPTPYG 408


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 565 TKVSIYPPKFHVTPFG 612
           T V + PPK + TP+G
Sbjct: 626 TTVRVRPPKVYPTPYG 641


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 565 TKVSIYPPKFHVTPFG 612
           T V + PPK + TP+G
Sbjct: 626 TTVRVRPPKVYPTPYG 641


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 514 EITTILKKFHFNIYFLVTKVSIY 582
           +I TILKK   NI+ L   V  +
Sbjct: 90  QIVTILKKTKSNIFILKESVDTF 112


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 514 EITTILKKFHFNIY 555
           ++T + K+FHFN Y
Sbjct: 264 QLTELEKEFHFNKY 277


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 246 REHPKKLDFIFT 211
           R   KKLDFIFT
Sbjct: 439 RNFRKKLDFIFT 450


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 514 EITTILKKFHFNIY 555
           ++T + K+FHFN Y
Sbjct: 53  QLTELEKEFHFNKY 66


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 514 EITTILKKFHFNIY 555
           ++T + K+FHFN Y
Sbjct: 53  QLTELEKEFHFNKY 66


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 462 FFFVLRHGVISTYTKIFWGNN 400
           F+F     +I+TY K F+ +N
Sbjct: 247 FYFFTTGNIIATYDKQFYIHN 267


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 462 FFFVLRHGVISTYTKIFWGNN 400
           F+F     +I+TY K F+ +N
Sbjct: 243 FYFFTTGNIIATYDKQFYIHN 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,901
Number of Sequences: 336
Number of extensions: 3236
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)