Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32004
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    30   0.054
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    27   0.38 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.2  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 30.3 bits (65), Expect = 0.054
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 533 RSFTSIYTF*SQKFQFTPQNFTLPHLGL 616
           R +   + +  Q  QF P NF LPH GL
Sbjct: 319 RDYDQAFQYYYQSTQFAPVNFVLPHFGL 346


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 477 FSTFHII--APMII*NHNDSKEVSLQYILFSHKSFNLPPKISR 599
           F TF I+  AP +   ++D+K + ++Y + + K FNL  K +R
Sbjct: 529 FGTFAILCEAPSL---YDDTKPIDIEYSIIAQKLFNLTVKDTR 568


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 565 TKVSIYPPKFHVTPFG 612
           TK+ +YPP   VTP+G
Sbjct: 313 TKMRVYPPTKIVTPYG 328


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 435 LPHGEEQKKTKS 470
           LPHG EQ+KT S
Sbjct: 376 LPHGWEQRKTAS 387


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 259 LSDHSRAPEETRFYFYTSGPP 197
           + D +  P  TRF F   GPP
Sbjct: 372 MGDLTEVPVPTRFIFILLGPP 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,095
Number of Sequences: 2352
Number of extensions: 11462
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)