Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32004
         (640 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067776-1|AAH67776.1|  415|Homo sapiens neuromedin U receptor 2...    30   8.0  
BC016938-1|AAH16938.1|  415|Homo sapiens neuromedin U receptor 2...    30   8.0  
AF292402-1|AAG03064.1|  415|Homo sapiens neuromedin U receptor-t...    30   8.0  
AF272363-1|AAG24794.1|  415|Homo sapiens neuromedin U receptor 2...    30   8.0  
AF242874-1|AAF82755.1|  412|Homo sapiens neuromedin U receptor 2...    30   8.0  
AB041228-1|BAB13721.1|  412|Homo sapiens G protein-coupled recep...    30   8.0  

>BC067776-1|AAH67776.1|  415|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 FNIYFLVTKVSIYPPKFHVTPFGVIYPGSPT 636
           F++ F +   SI+  KFH  P G + PGS T
Sbjct: 173 FSVLFSLPNTSIHGIKFHYFPNGSLVPGSAT 203


>BC016938-1|AAH16938.1|  415|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 FNIYFLVTKVSIYPPKFHVTPFGVIYPGSPT 636
           F++ F +   SI+  KFH  P G + PGS T
Sbjct: 173 FSVLFSLPNTSIHGIKFHYFPNGSLVPGSAT 203


>AF292402-1|AAG03064.1|  415|Homo sapiens neuromedin U receptor-type
           2 protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 FNIYFLVTKVSIYPPKFHVTPFGVIYPGSPT 636
           F++ F +   SI+  KFH  P G + PGS T
Sbjct: 173 FSVLFSLPNTSIHGIKFHYFPNGSLVPGSAT 203


>AF272363-1|AAG24794.1|  415|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 FNIYFLVTKVSIYPPKFHVTPFGVIYPGSPT 636
           F++ F +   SI+  KFH  P G + PGS T
Sbjct: 173 FSVLFSLPNTSIHGIKFHYFPNGSLVPGSAT 203


>AF242874-1|AAF82755.1|  412|Homo sapiens neuromedin U receptor 2
           protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 FNIYFLVTKVSIYPPKFHVTPFGVIYPGSPT 636
           F++ F +   SI+  KFH  P G + PGS T
Sbjct: 170 FSVLFSLPNTSIHGIKFHYFPNGSLVPGSAT 200


>AB041228-1|BAB13721.1|  412|Homo sapiens G protein-coupled receptor
           TGR-1 protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 544 FNIYFLVTKVSIYPPKFHVTPFGVIYPGSPT 636
           F++ F +   SI+  KFH  P G + PGS T
Sbjct: 170 FSVLFSLPNTSIHGIKFHYFPNGSLVPGSAT 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,635,212
Number of Sequences: 237096
Number of extensions: 1727199
Number of successful extensions: 5756
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5756
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)