Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32004
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U22833-2|AAA64322.2|  707|Caenorhabditis elegans Temporarily ass...    31   0.92 
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    30   1.2  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     30   1.2  

>U22833-2|AAA64322.2|  707|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 161 protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 450 EQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQYILFSHKSFNLPPKI 593
           +++ TK+      HI+  M+   HN SKE SLQ++ +     N+PP +
Sbjct: 99  DERLTKAREIYDHHIMVEMLAHAHNYSKE-SLQHVQYHLLKQNVPPDL 145


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 438  PHGEEQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQ 548
            P  EE K+ +S PF TFH+   +I  NH      SLQ
Sbjct: 6167 PRVEEFKERRSAPFFTFHLRNRLIQKNHQCKLTCSLQ 6203


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 438  PHGEEQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQ 548
            P  EE K+ +S PF TFH+   +I  NH      SLQ
Sbjct: 6696 PRVEEFKERRSAPFFTFHLRNRLIQKNHQCKLTCSLQ 6732


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 438  PHGEEQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQ 548
            P  EE K+ +S PF TFH+   +I  NH      SLQ
Sbjct: 6377 PRVEEFKERRSAPFFTFHLRNRLIQKNHQCKLTCSLQ 6413


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 438  PHGEEQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQ 548
            P  EE K+ +S PF TFH+   +I  NH      SLQ
Sbjct: 6167 PRVEEFKERRSAPFFTFHLRNRLIQKNHQCKLTCSLQ 6203


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 438  PHGEEQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQ 548
            P  EE K+ +S PF TFH+   +I  NH      SLQ
Sbjct: 6696 PRVEEFKERRSAPFFTFHLRNRLIQKNHQCKLTCSLQ 6732


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 438  PHGEEQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQ 548
            P  EE K+ +S PF TFH+   +I  NH      SLQ
Sbjct: 6377 PRVEEFKERRSAPFFTFHLRNRLIQKNHQCKLTCSLQ 6413


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 438  PHGEEQKKTKSLPFSTFHIIAPMII*NHNDSKEVSLQ 548
            P  EE K+ +S PF TFH+   +I  NH      SLQ
Sbjct: 5586 PRVEEFKERRSAPFFTFHLRNRLIQKNHQCKLTCSLQ 5622


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,211,308
Number of Sequences: 27780
Number of extensions: 280746
Number of successful extensions: 482
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)