Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31997
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. 168 1e-41
BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,... 167 3e-41
AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase pr... 167 3e-41
DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate de... 157 4e-38
AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. 155 1e-37
BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein. 45 2e-04
AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase p... 45 2e-04
AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens ... 45 2e-04
BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 33 1.3
AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 33 1.3
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 33 1.3
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 5.2
>CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein.
Length = 338
Score = 168 bits (409), Expect = 1e-41
Identities = 84/149 (56%), Positives = 108/149 (72%)
Frame = +3
Query: 57 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 236
M S ++P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALVRPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 237 IAPVTPGVAADLSHVNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 416
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 417 NASIVRDIALSIAQNAPKAIVAIITNPVN 503
NA+IV + + AQ+ P+A++ +I NPVN
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVN 145
Score = 66.1 bits (154), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 499 LTSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGRGP 636
+ ST+PI +EV KK GVY+PN++ GVTTLD+VRA TFV E+ G P
Sbjct: 144 VNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDP 189
>BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,
NAD (mitochondrial) protein.
Length = 338
Score = 167 bits (407), Expect = 3e-41
Identities = 84/149 (56%), Positives = 107/149 (71%)
Frame = +3
Query: 57 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 236
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 237 IAPVTPGVAADLSHVNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 416
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 417 NASIVRDIALSIAQNAPKAIVAIITNPVN 503
NA+IV + + AQ+ P+A++ +I NPVN
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVN 145
Score = 66.1 bits (154), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 499 LTSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGRGP 636
+ ST+PI +EV KK GVY+PN++ GVTTLD+VRA TFV E+ G P
Sbjct: 144 VNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDP 189
>AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase
precursor protein.
Length = 338
Score = 167 bits (407), Expect = 3e-41
Identities = 84/149 (56%), Positives = 107/149 (71%)
Frame = +3
Query: 57 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 236
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 237 IAPVTPGVAADLSHVNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 416
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 417 NASIVRDIALSIAQNAPKAIVAIITNPVN 503
NA+IV + + AQ+ P+A++ +I NPVN
Sbjct: 117 NATIVATLTAACAQHCPEAMICVIANPVN 145
Score = 66.1 bits (154), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 499 LTSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGRGP 636
+ ST+PI +EV KK GVY+PN++ GVTTLD+VRA TFV E+ G P
Sbjct: 144 VNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDP 189
>DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate
dehydrogenase 2, NAD protein.
Length = 305
Score = 157 bits (381), Expect = 4e-38
Identities = 77/125 (61%), Positives = 92/125 (73%)
Frame = +3
Query: 129 QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHVNTPAKVSGH 308
Q N K IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+
Sbjct: 1 QNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGY 59
Query: 309 KGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAII 488
GPE+L +K DVVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++ +I
Sbjct: 60 LGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVI 119
Query: 489 TNPVN 503
NPVN
Sbjct: 120 ANPVN 124
Score = 66.1 bits (154), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 499 LTSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGRGP 636
+ ST+PI +EV KK GVY+PN++ GVTTLD+VRA TFV E+ G P
Sbjct: 123 VNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDP 168
>AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 155 bits (376), Expect = 1e-37
Identities = 74/111 (66%), Positives = 89/111 (80%)
Frame = +3
Query: 171 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHVNTPAKVSGHKGPEELSAAIKDAD 350
IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+ GPE+L +K D
Sbjct: 14 IGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCD 72
Query: 351 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVN 503
VVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++ +I NPVN
Sbjct: 73 VVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 123
Score = 66.1 bits (154), Expect = 1e-10
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 499 LTSTVPIASEVLKKAGVYDPNRVLGVTTLDVVRAATFVGEINGRGP 636
+ ST+PI +EV KK GVY+PN++ GVTTLD+VRA TFV E+ G P
Sbjct: 122 VNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDP 167
>BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein.
Length = 234
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +3
Query: 108 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHVN 284
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 285 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 464
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 465 PKAIVAIITNPVN 503
P + I+TNPV+
Sbjct: 129 PHCKLLIVTNPVD 141
>AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase
protein.
Length = 332
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +3
Query: 108 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHVN 284
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 285 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 464
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 465 PKAIVAIITNPVN 503
P + I+TNPV+
Sbjct: 129 PHCKLLIVTNPVD 141
>AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ43406 fis, clone OCBBF2019823, highly similar
to Homo sapiens lactate dehydrogenase A -like (LDHL). ).
Length = 332
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Frame = +3
Query: 108 KNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHVN 284
KNF+ + +G A+ + L L L D+ G DL H +
Sbjct: 10 KNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKGETMDLQHGS 69
Query: 285 TPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNA 464
K+ ++ ++++V+I AG +K G TR DL N SI + + +I Q +
Sbjct: 70 PFMKMPNIVSSKDYLVTA-NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYS 128
Query: 465 PKAIVAIITNPVN 503
P + I+TNPV+
Sbjct: 129 PHCKLLIVTNPVD 141
>BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 153 RPPL*SSSVMWWKSSLHHFVQQ 88
RPPL SS WW+SSL +F QQ
Sbjct: 125 RPPLGSSLSPWWRSSLTYFQQQ 146
>AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ14786 fis, clone NT2RP4000737, moderately
similar to Mus musculus F-box protein FBL10 mRNA. ).
Length = 653
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 153 RPPL*SSSVMWWKSSLHHFVQQ 88
RPPL SS WW+SSL +F QQ
Sbjct: 151 RPPLGSSLSPWWRSSLTYFQQQ 172
>AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to
Homo sapiens F-box protein Lilina (LILINA) mRNA. ).
Length = 704
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 153 RPPL*SSSVMWWKSSLHHFVQQ 88
RPPL SS WW+SSL +F QQ
Sbjct: 202 RPPLGSSLSPWWRSSLTYFQQQ 223
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 153 RPPL*SSSVMWWKSSLHHFVQQ 88
RPPL SS WW+SSL +F QQ
Sbjct: 834 RPPLGSSLSPWWRSSLTYFQQQ 855
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 153 RPPL*SSSVMWWKSSLHHFVQQ 88
RPPL SS WW+SSL +F QQ
Sbjct: 358 RPPLGSSLSPWWRSSLTYFQQQ 379
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 176 PAFGPSTEAESSGDQAGFIRHSACDPRRRSRPFPREHPSQGQRP 307
P G TE + G A + ++ +P PFP E PS + P
Sbjct: 761 PPTGAETEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 804
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,263,403
Number of Sequences: 237096
Number of extensions: 2544785
Number of successful extensions: 6145
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6139
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -