Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31992
         (660 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0298 - 42586007-42589742,42590167-42590280,42590295-425904...   107   6e-24
02_05_0036 - 25292150-25293124,25294021-25294206,25294704-252948...    29   2.5  

>01_07_0298 -
           42586007-42589742,42590167-42590280,42590295-42590437,
           42591174-42591347
          Length = 1388

 Score =  107 bits (258), Expect = 6e-24
 Identities = 45/65 (69%), Positives = 55/65 (84%)
 Frame = +2

Query: 5   EVAMGFINVANEAMCRPIRALTTARGHDAAQHALACFGGAGGQHACSVARRLGISTVLIH 184
           E+A+GF+NVANEAMCRPIR LT  +GHD   HALACFGGAG QHAC++AR LG+S +LIH
Sbjct: 586 EIALGFVNVANEAMCRPIRQLTEMKGHDTKNHALACFGGAGPQHACAMARSLGMSELLIH 645

Query: 185 KYAGM 199
           +Y G+
Sbjct: 646 RYCGI 650



 Score = 27.9 bits (59), Expect = 7.6
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +3

Query: 555 GVSDLVLHWRRYMFLCSSILSAYGMALAHIVHE 653
           G+S+L++H  RY   C  ILSAYGM LA ++ +
Sbjct: 638 GMSELLIH--RY---CG-ILSAYGMGLADVIED 664


>02_05_0036 -
           25292150-25293124,25294021-25294206,25294704-25294874,
           25295135-25295353,25295461-25295712,25295802-25295903,
           25296487-25296684,25296762-25297046,25297640-25297709,
           25297797-25297970,25298825-25298952,25299059-25299163,
           25299686-25300030,25300361-25300563,25300964-25301045,
           25301667-25301744
          Length = 1190

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = +3

Query: 426 SLYIIVVGSHHTP-QDI*QMPES----RLRHFLRQVCLCSYIAS*YARGVSDLVLHWRRY 590
           +LY+I+V  H TP QD+   PE     RL   L Q C   +      R +   +LH++RY
Sbjct: 791 TLYLIIVFGHGTPEQDVLDPPEDCFRIRLIITLLQTCGHYFNRGSSKRKLDKFLLHFQRY 850

Query: 591 M 593
           +
Sbjct: 851 I 851


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,463,607
Number of Sequences: 37544
Number of extensions: 313985
Number of successful extensions: 801
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)