Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31991
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 336 4e-91
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 304 1e-81
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 279 6e-74
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 252 8e-66
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 246 4e-64
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 221 1e-56
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 200 3e-50
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 170 2e-41
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 136 6e-31
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 115 1e-24
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 105 1e-21
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 104 2e-21
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 92 1e-17
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 92 1e-17
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 87 3e-16
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 66 8e-10
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 65 2e-09
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 63 6e-09
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 56 8e-07
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 55 2e-06
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 50 5e-05
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 48 2e-04
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 48 3e-04
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 47 5e-04
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 46 7e-04
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 45 0.002
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 44 0.005
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 43 0.006
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 43 0.006
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 35 1.7
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.9
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 336 bits (825), Expect = 4e-91
Identities = 153/208 (73%), Positives = 174/208 (83%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGISRD+WHKRR GGKR P KKRKYELGRPAANT++GP+ IH+VR RG N K RALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLP 314
D GNFSWGSEC TRKTRIIDVVYNAS NELVRTK LVKN IV++D+TP+RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 313 LGRKKGAKLTEXEEXIITKKRSQKPARKYLARQRLVKVEGAXEEQFXXGRLLACVASRPG 134
LGRKKGAKLT EE I+ KKRS+K +KY R++ K+ EEQF G+LLAC+ASRPG
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 180
Query: 133 QCGRADGYILEGKELEFYXRKIKSKRAK 50
QCGRADGY+LEGKELEFY RKIK+++ K
Sbjct: 181 QCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 304 bits (747), Expect = 1e-81
Identities = 144/208 (69%), Positives = 167/208 (80%), Gaps = 2/208 (0%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGISRD HKRR GGKR +RKKRK+ELGRPAANT+LG +H VR+RG N K RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLP 314
+ GNF+W SE RKTRI DVVYNAS NELVRTK LVKN+IVV+DATPFRQWYE+HY LP
Sbjct: 61 ETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLP 120
Query: 313 LGRKKGAK--LTEXEEXIITKKRSQKPARKYLARQRLVKVEGAXEEQFXXGRLLACVASR 140
LGRK+ K E E ++TKKRS+K +KYL RQ+ KVE A E+QF GR+LAC++SR
Sbjct: 121 LGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSR 180
Query: 139 PGQCGRADGYILEGKELEFYXRKIKSKR 56
PGQCGR+DGYILEGKELEFY +KIKSK+
Sbjct: 181 PGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 279 bits (683), Expect = 6e-74
Identities = 137/208 (65%), Positives = 158/208 (75%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGISRD+WHKRR GGKR P KKRKYELGRPAANT++GP+ IH+VR RG
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG--------- 51
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLP 314
C TRKTRIIDVVYNAS NELVRTK LVKN IV++D+TP+RQWYESHY LP
Sbjct: 52 ----------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 100
Query: 313 LGRKKGAKLTEXEEXIITKKRSQKPARKYLARQRLVKVEGAXEEQFXXGRLLACVASRPG 134
LGRKKGAKLT EE I+ KKRS+K +KY R++ K+ EEQF G+LLAC+ASRPG
Sbjct: 101 LGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPG 160
Query: 133 QCGRADGYILEGKELEFYXRKIKSKRAK 50
QCGRADGY+LEGKELEFY RKIK+++ K
Sbjct: 161 QCGRADGYVLEGKELEFYLRKIKARKGK 188
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 252 bits (616), Expect = 8e-66
Identities = 115/149 (77%), Positives = 127/149 (85%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGISRD+WHKRR GGKR P KKRKYELGRPAANT++GP+ IH+VR RG N K RALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLP 314
D GNFSWGSEC TRKTRIIDVVYNAS NELVRTK LVKN IV++D+TP+RQWYESHY LP
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALP 120
Query: 313 LGRKKGAKLTEXEEXIITKKRSQKPARKY 227
LGRKKGAKLT EE I+ KKRS+K +KY
Sbjct: 121 LGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 246 bits (602), Expect = 4e-64
Identities = 128/217 (58%), Positives = 151/217 (69%), Gaps = 9/217 (4%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGP-QXIHSVRSRGXNNKXRALR 497
MGISRD HKRR GGK+ RKKRKYELGR ANT+L + + VR RG N K RALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 496 LDXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTL 317
LD GN+SWGSE TRKTRI+DVVYNAS NELVRT+ LVK+AIV VDA PF+QWY +HY +
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 316 PLGRKK--------GAKLTEXEEXIITKKRSQKPARKYLARQRLVKVEGAXEEQFXXGRL 161
+GRKK A+ E E K+S RK R+ ++ EEQF GRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180
Query: 160 LACVASRPGQCGRADGYILEGKELEFYXRKIKSKRAK 50
LAC++SRPGQCGRADGYILEGKELEFY +K++ K+ K
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 221 bits (541), Expect = 1e-56
Identities = 114/206 (55%), Positives = 141/206 (68%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGISRD HKRR GG+ +KKRKYELGRP++NT+LG + + VR RG N K RALRL
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLP 314
D GNFSWGS+ TRKTR++DVVYNAS NELVRTK LVKNAIV VD TPF+ W+++HY L
Sbjct: 61 DSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLE 120
Query: 313 LGRKKGAKLTEXEEXIITKKRSQKPARKYLARQRLVKVEGAXEEQFXXGRLLACVASRPG 134
LG+ E+ ++K + R L +QF GRLLAC++SRPG
Sbjct: 121 LGKSS-------EDPQASEKVAALVPRTLL-------------DQFSSGRLLACISSRPG 160
Query: 133 QCGRADGYILEGKELEFYXRKIKSKR 56
QCGR DGY+LEG+EL FY R++ K+
Sbjct: 161 QCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 200 bits (488), Expect = 3e-50
Identities = 107/219 (48%), Positives = 135/219 (61%), Gaps = 13/219 (5%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGI R HKR+ GGK RK+ K ELGR ANTRLG + + VR+RG N K RALRL
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLP 314
D GNF+W SE + R++DVVYNA+ NELVRTK LVKN IV VDA PF++WY HY +
Sbjct: 61 DTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGID 120
Query: 313 L------------GRKKGAKLTE-XEEXIITKKRSQKPARKYLARQRLVKVEGAXEEQFX 173
L KKG K + K S K R++ R+R +VE A +Q
Sbjct: 121 LDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLR 180
Query: 172 XGRLLACVASRPGQCGRADGYILEGKELEFYXRKIKSKR 56
GR+LA + SRPGQ GRADG +LEG EL+FY ++++ K+
Sbjct: 181 EGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 170 bits (414), Expect = 2e-41
Identities = 98/236 (41%), Positives = 135/236 (57%), Gaps = 30/236 (12%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGI+RD HKRR GGK+ ++KK+K +GR ANTRLG +H VR R K RALRL
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLP 314
+ GNFSW S+ T+ T+I++VVYNAS N+ VRT LVK AI+ +D PFR W+ Y
Sbjct: 61 ENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKD 120
Query: 313 LGRK------KGAKLTEXEEXIITKKRSQK-----------------PA----RKYLARQ 215
+ + A ++ ++ K+ K P+ +KY +
Sbjct: 121 IASTDYYKSLESATFKTEKKVVVPKEEENKEKTIAQQIAETQVALMNPSKTMQKKYAKKL 180
Query: 214 RL---VKVEGAXEEQFXXGRLLACVASRPGQCGRADGYILEGKELEFYXRKIKSKR 56
+ +K + A E F GR+LAC++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 181 EVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 136 bits (328), Expect = 6e-31
Identities = 65/120 (54%), Positives = 86/120 (71%), Gaps = 1/120 (0%)
Frame = -1
Query: 628 GKRAPIRKKRKYELGRPAANTRLGP-QXIHSVRSRGXNNKXRALRLDXGNFSWGSECSTR 452
G P+++++ YELGR ANT+L + + VR RG N K RALR D N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 451 KTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEXEE 272
KTRI+DVVY A+ NELVRT+ LVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 173 KTRILDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 115 bits (276), Expect = 1e-24
Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 9/120 (7%)
Frame = -1
Query: 382 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EXEEXIITKKRSQKPARKYL 224
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 223 ARQRL--VKVEGAXEEQFXXGRLLACVASRPGQCGRADGYILEGKELEFYXRKIKSKRAK 50
RQ L VE + +E+F GRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 105 bits (252), Expect = 1e-21
Identities = 56/119 (47%), Positives = 72/119 (60%), Gaps = 9/119 (7%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRL---------GPQXIHSVRSRGX 521
MGI+ D +KR G + KKRKY LGR ANT+L Q I ++R RG
Sbjct: 1 MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGG 60
Query: 520 NNKXRALRLDXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFR 344
N K RALRL G+F+WGS + K RI+ VVYN++ NELVRT LVK +V +D+ PF+
Sbjct: 61 NIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = -1
Query: 184 EQFXXGRLLACVASRPGQCGRADGYILEGKELEFYXRKIKSK 59
+Q +LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 104 bits (249), Expect = 2e-21
Identities = 50/81 (61%), Positives = 57/81 (70%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGISRD HKR G KR+ RKKR +E GR ANTR+GP+ IH VR+RG N K R LRL
Sbjct: 1 MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDV 431
+ GNFSWGSE RK R+I V
Sbjct: 61 ESGNFSWGSEGIARKVRVIVV 81
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/82 (48%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = -1
Query: 307 RKKGAKLTEXEEXIITKKRSQKPARKYLARQRLV-KVEGAXEEQFXXGRLLACVASRPGQ 131
R + + E I K R +K AR KVE A E+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 130 CGRADGYILEGKELEFYXRKIK 65
GR DGYILEG+EL FY R I+
Sbjct: 119 SGRVDGYILEGEELAFYQRAIR 140
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 92.3 bits (219), Expect = 1e-17
Identities = 48/105 (45%), Positives = 66/105 (62%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGI+R+ HKR+ GG ++ RKKR + GR +NT++G + + +R RG K RAL L
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVD 359
GNFS+ S T K +I+ V +N S NELVRT L K +IV +D
Sbjct: 61 SYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLD 105
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = -1
Query: 184 EQFXXGRLLACVASRPGQCGRADGYILEGKELEFYXRKIKSK 59
+Q G++LA + SRPGQ GRADGYILEG+EL+++ +KI+ K
Sbjct: 137 DQILSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 92.3 bits (219), Expect = 1e-17
Identities = 46/110 (41%), Positives = 66/110 (60%)
Frame = -1
Query: 673 MGISRDHWHKRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRL 494
MGI+ HKRR G K RKKR G ++T++G + + VR RG N K +ALRL
Sbjct: 1 MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRL 60
Query: 493 DXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPFR 344
D G+F + + R +++ VVY+ S NELVRT L K+++V + A PF+
Sbjct: 61 DMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = -1
Query: 202 VEGAXEEQFXXGRLLACVASRPGQCGRADGYILEGKELEFYXRKIKSK 59
V+ + E F G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 87.4 bits (207), Expect = 3e-16
Identities = 46/86 (53%), Positives = 55/86 (63%)
Frame = -1
Query: 307 RKKGAKLTEXEEXIITKKRSQKPARKYLARQRLVKVEGAXEEQFXXGRLLACVASRPGQC 128
R+ + T EE ++ KKRS+K +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 127 GRADGYILEGKELEFYXRKIKSKRAK 50
GRADGYILEGKELEFY RKIK+K+ K
Sbjct: 124 GRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = -1
Query: 646 KRRPXGGKRAPIRKKRKYELGRPAANTRLG-PQXIHSVRSRGXNNKXRALRLDXGNFSWG 470
K++ GGK+ I KK+ + G NT L I R RG N K +A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62
Query: 469 SECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDATPF 347
+ ++ ++I+ V+YN + +LV+ + L K I+ +D+ PF
Sbjct: 63 TMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDSMPF 103
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/92 (35%), Positives = 49/92 (53%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRLDXGNFSWGSE 464
R+P GGK P KR+YELGR TRLG + + +RS G N+K LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 463 CSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
+TRK +I V N++ V+ + + ++
Sbjct: 70 KTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 63.3 bits (147), Expect = 6e-09
Identities = 35/92 (38%), Positives = 51/92 (55%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRLDXGNFSWGSE 464
R+P GG+ + K++ E+GR A T +G + VR+ G N K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 463 CSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
T+KT+I V N++ VR K L K AI+
Sbjct: 69 GETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 56.0 bits (129), Expect = 8e-07
Identities = 38/92 (41%), Positives = 51/92 (55%)
Frame = -1
Query: 409 ELVRTKXLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEXEEXIITKKRSQKPARK 230
ELVRT+ LVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 229 YLARQRLVKVEGAXEEQFXXGRLLACVASRPG 134
RQ+ K++ EEQF GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHS-VRSRGXNNKXRALRLDXGNFSWGS 467
++P GG+ RKKRK ELGR +NTR+ Q +R+ G N K R N +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68
Query: 466 ECSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
RK RII V+ N + + R + K AI+
Sbjct: 69 SGKGRKVRIIRVLENPANRQFARRNIITKGAII 101
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 50.0 bits (114), Expect = 5e-05
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Frame = -1
Query: 673 MGISRDHWH-KRRPXGGKRAPIRK-KRKYELGRPAANTRLG---PQXIHSVRSRGXNNKX 509
MGI + W K++P GGKR K KRKY GRP T L + VR+RG + K
Sbjct: 1 MGIYQ--WRDKKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKI 58
Query: 508 RALRLDXGNFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
+A ++ S RK RI+ +V + E R +VK A++
Sbjct: 59 KAKKVAFAVVSNPKTGEARKARILRIVETPAHREYARRGIIVKGAVI 105
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSV-RSRGXNNKXRALRLDXGNFSWGS 467
++ GG RKKR++ELGR T+LG + V R+ G N K + N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 466 ECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVD 359
E +K +II V N + + V+ + K ++ +
Sbjct: 70 EKKIKKAKIITVKANPANSHYVQRNIINKGTVIATE 105
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/95 (29%), Positives = 42/95 (44%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRLDXGNFSWGSE 464
R+ GG+ R KRK+ELGR +G Q + + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 463 CSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVD 359
T+K ++ V N + VR L K V +
Sbjct: 69 GKTQKVKMTTVTENPANKNYVRRNFLTKGTFVTTE 103
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/92 (29%), Positives = 43/92 (46%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRLDXGNFSWGSE 464
R+P G + + KR E GR A TR+G + + +RG K RA N +
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRATVAKRINVIDPKD 69
Query: 463 CSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
S++ ++ V+ N + + VR + K AIV
Sbjct: 70 NSSKNVEMLTVLENGANSHFVRRNIITKGAIV 101
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 46.4 bits (105), Expect = 7e-04
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = -1
Query: 652 WHKR---RPXGGKRAPIRKKRKYELGRPAANTRLGPQ-XIHSVRSRGXNNKXRALRLDXG 485
WH R +P GG+ P RKKRK+E+G P T +G + + R G N K
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVKKGLKFATHA 63
Query: 484 NFSWGSECSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
N + + RI +VV N + R + K AI+
Sbjct: 64 NVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAII 102
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIH-SVRSRGXNNKXRALRLDXGNFSWGS 467
R+ GG + R KRKYE+G P T L + I R+ G N K R N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 466 ECSTRKTRIIDVVYNASXNELVRTKXLVKNAIVVVDA 356
+ +K +I++++ + EL R +++ A + +A
Sbjct: 70 TNTAKKVKILEILETPANKELARRGIIIRGAKIRTEA 106
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/88 (27%), Positives = 43/88 (48%)
Frame = -1
Query: 631 GGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSRGXNNKXRALRLDXGNFSWGSECSTR 452
GG+R P+R +RKYE+ R G Q + + RG K +D N + +
Sbjct: 15 GGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGAKVK 73
Query: 451 KTRIIDVVYNASXNELVRTKXLVKNAIV 368
K++I+ V+ N + N+ R + + A++
Sbjct: 74 KSKIVKVLENPTNNDYRRRGVITRGAVL 101
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = -1
Query: 643 RRPXGGKRAPIRKKRKYEL-GRPAANTRLGPQXIHSV-RSRGXNNKXRALRLDXGNFSWG 470
++P GGK+ +RK +K L G P +LG V R RG N K R N
Sbjct: 13 KKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIP 72
Query: 469 SECSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
E + K +II ++ + + R +VK +++
Sbjct: 73 KERKSVKAKIISIISTPANPDFARRNFIVKGSVI 106
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = -1
Query: 646 KRRPXGGKRAPIRKKRKYELGRPAANTRLGPQXIHS-VRSRGXNNKXRALRLDXGNFSWG 470
+R G K KK K E+GRPAA T++ + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYANVFDQ 68
Query: 469 SECSTRKTRIIDVVYNASXNELVRTKXLVKNAIV 368
+ +K + +V+ N + +R + K AI+
Sbjct: 69 ANKVCKKVVVTNVIDNKANKHYIRRNVMTKGAII 102
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 35.1 bits (77), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 631 GGKRAPIRKKRKYELGRPAANTRLGPQXIHSVRSR 527
G +RAP K YE R AA TRL P + ++R R
Sbjct: 270 GAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1
Query: 358 ATPFRQWYESHYTLPLGRKKGAKLTEXE 275
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 373 IVVVDATPFRQWYESHYTLPLGRKK 299
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,026,733
Number of Sequences: 1657284
Number of extensions: 10376132
Number of successful extensions: 22727
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22705
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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