Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31982
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.3  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   2.2  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   2.2  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   3.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   9.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -1

Query: 300 VFNSMLR-GLPANNHVTNHSRDQRLIICANVQSYT--FAIKE 184
           V+N + R   PA  ++T ++  Q   I AN+ SYT   A+KE
Sbjct: 40  VYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKE 81


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -1

Query: 300 VFNSMLR-GLPANNHVTNHSRDQRLIICANVQSYT--FAIKE 184
           V+N + R   PA  ++T ++  Q   I AN+ SYT   A+KE
Sbjct: 40  VYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKE 81


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = +3

Query: 321 FSQKNHTEYYCNHMVRIYF 377
           ++  N+ + YCN+  ++Y+
Sbjct: 91  YNNNNYKKLYCNNYKKLYY 109


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = +3

Query: 321 FSQKNHTEYYCNHMVRIYF 377
           ++  N+ + YCN+  ++Y+
Sbjct: 91  YNNNNYKKLYCNNYKKLYY 109


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = +3

Query: 321 FSQKNHTEYYCNHMVRIYF 377
           ++  N+ + YCN+  ++Y+
Sbjct: 91  YNNNNYKKLYCNNYRKLYY 109


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 360 YDYSSIPYGFSGKM 319
           + YSS PYGF  ++
Sbjct: 589 FKYSSQPYGFPERL 602


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 360 YDYSSIPYGFSGKM 319
           + YSS PYGF  ++
Sbjct: 589 FKYSSQPYGFPERL 602


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = -1

Query: 339 YGFSGKMSAILNHVFNSMLRGLPANNHVTNHSRDQRLIICANVQSYTFAIKEKATKND 166
           Y   GK+S I +   N     L A + V N+S  +  +  A V+++  +  +K  + D
Sbjct: 557 YNLLGKLSTIEDADKNQCRHYLDAKSSVQNYSLAKHQLKEAFVKAHLGSWVKKPIEQD 614


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,728
Number of Sequences: 438
Number of extensions: 1758
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)