Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31979
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97005-9|AAK72085.1|  829|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AC006780-5|AAF60646.1|  287|Caenorhabditis elegans Hypothetical ...    27   8.5  

>U97005-9|AAK72085.1|  829|Caenorhabditis elegans Hypothetical
           protein F19F10.9 protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 37  DGLIYLDSNRYFLGHVGSITLVG 105
           +G IY+DS   +  HVG IT +G
Sbjct: 527 EGQIYIDSTTEYCRHVGEITTLG 549


>AC006780-5|AAF60646.1|  287|Caenorhabditis elegans Hypothetical
           protein Y47D9A.2a protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 475 AFVLVVKRAVN*HGYHHSTNSCHRAVMCSGLKA*TTVILHNRDLVLHKYRYSD 317
           +F   +   +    + H  N      +CS L+A  T+    R+++ HKYR  D
Sbjct: 186 SFAYQLDNGIPIESWFHDRNDTELLKLCSFLEAIPTLGRDVREILRHKYRLRD 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,877,319
Number of Sequences: 27780
Number of extensions: 236482
Number of successful extensions: 465
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)