Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31975
(304 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 116 5e-27
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 106 3e-24
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 98 1e-21
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 79 2e-20
08_02_0610 + 19307537-19308011,19308187-19310846 29 0.70
08_02_0897 - 22362136-22363698 29 0.92
01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707 29 0.92
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 28 1.2
04_04_1345 + 32792879-32794207 27 2.1
09_04_0135 - 14954060-14954156,14955027-14956024 27 2.8
08_02_0407 + 16818621-16819403 27 2.8
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866 27 2.8
02_05_0664 + 30717551-30719491 27 2.8
12_02_0662 + 21648616-21648766,21650071-21650198,21650598-21650882 27 3.7
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 27 3.7
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 27 3.7
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 27 3.7
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 27 3.7
09_06_0072 - 20682424-20682870,20683928-20684854 26 4.9
07_01_0517 - 3854875-3855120,3855944-3856144 26 4.9
01_06_0675 + 31092877-31092916,31093349-31093503,31093570-310936... 26 6.5
06_03_0704 + 23706318-23707024,23707093-23707222 25 8.6
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002 25 8.6
01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 25 8.6
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 116 bits (278), Expect = 5e-27
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +3
Query: 102 FPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTH 281
+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIFNGKK ED PS+H
Sbjct: 21 YPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSH 80
Query: 282 NMDVPHV 302
N DVPHV
Sbjct: 81 NCDVPHV 87
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 106 bits (255), Expect = 3e-24
Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 4/71 (5%)
Frame = +3
Query: 102 FPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXX 269
+P Q +RKNG++++K RPCK +VE+STSKTGKHGHAK H V IDIFNGKK ED
Sbjct: 34 YPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIV 93
Query: 270 PSTHNMDVPHV 302
PS+HN DVPHV
Sbjct: 94 PSSHNCDVPHV 104
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 97.9 bits (233), Expect = 1e-21
Identities = 46/80 (57%), Positives = 54/80 (67%), Gaps = 13/80 (16%)
Frame = +3
Query: 102 FPMQCSALRKNGFVMLKGRPCK-------------IVEMSTSKTGKHGHAKVHLVGIDIF 242
+P Q +RKNG +++K RPCK +VE+STSKTGKHGHAK H V IDIF
Sbjct: 1343 YPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVSTSKTGKHGHAKCHFVAIDIF 1402
Query: 243 NGKKYEDXXPSTHNMDVPHV 302
NGKK ED PS+HN DVPHV
Sbjct: 1403 NGKKLEDIVPSSHNCDVPHV 1422
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 79.0 bits (186), Expect(2) = 2e-20
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +3
Query: 165 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTHNMDVPHV 302
K+VE+STSKTGKHGHAK H V IDIF KK ED PS+HN DVPHV
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHV 119
Score = 35.9 bits (79), Expect(2) = 2e-20
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 102 FPMQCSALRKNGFVMLKGRPCK 167
+P Q +RKNG++++K RPCK
Sbjct: 21 YPQQAGTIRKNGYIVIKNRPCK 42
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 72 EVCVFDVTHCCVLNLTTVRNDM 7
+VC FD+ CC L T+ NDM
Sbjct: 835 DVCHFDLRTCCALPPATLENDM 856
>08_02_0897 - 22362136-22363698
Length = 520
Score = 28.7 bits (61), Expect = 0.92
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 215 FSVAVLSGFGCGHFNNLAWTTLQHNE-TVFTQGRTLHGEGGEAPESPVS 72
F+ A G H N +TL N T G+ GEG +A E PVS
Sbjct: 162 FAAASSGRSGAVHLNRDHLSTLSMNVITRMVLGKRFFGEGADAAEGPVS 210
>01_05_0298 + 20591470-20591892,20592696-20592892,20594446-20594707
Length = 293
Score = 28.7 bits (61), Expect = 0.92
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 2 GHISFLTVVKFKTQQWVTSKTHTSTPETPGPHHL 103
GH V +F+ +W H+S P PH+L
Sbjct: 258 GHFHVTNVYEFRNGRWYMVHHHSSLMADPAPHNL 291
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 28.3 bits (60), Expect = 1.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 176 FNNLAWTTLQHNETVFTQGRTLHGEGG 96
+N+ AW + ++ +F G +HG GG
Sbjct: 167 YNSAAWASFSSHQPIFLPGHGVHGCGG 193
>04_04_1345 + 32792879-32794207
Length = 442
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 67 HFDTGDSGASPPSPCNVRPCVKTVSL 144
H GD A+PPSP + ++T+SL
Sbjct: 17 HTPAGDVAATPPSPLDATAVLETLSL 42
>09_04_0135 - 14954060-14954156,14955027-14956024
Length = 364
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 58 EDTHFDTGDSGASPPSPCNVRPCVKTVS 141
+D D GDSGA P CN + ++S
Sbjct: 298 DDVLLDGGDSGAMSPRTCNAFQLISSMS 325
>08_02_0407 + 16818621-16819403
Length = 260
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 161 WTTLQHNETVFTQGRTLHGEGGEAP 87
W T H T R L G GG+ P
Sbjct: 88 WLTTSHRRWTITSRRRLSGRGGDVP 112
>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
Length = 785
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 250 LPLKISIPTK*TLAWPCFPVLDVDISTILHGRPFSITKPFLRRA 119
L L +++PT+ + VL D+STI + P +TK F+ R+
Sbjct: 204 LQLALNVPTEESSLTFGDRVLKNDLSTIRNDSPLLLTKTFMHRS 247
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 201 HGHAKVHLVGIDIFNGKKYEDXXPSTHNMDVPHV 302
HG+ L+ D+ G D HNM++ H+
Sbjct: 385 HGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
>12_02_0662 + 21648616-21648766,21650071-21650198,21650598-21650882
Length = 187
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 74 TPETPGPHHLPHAMFGPA 127
TP P PHHLP A PA
Sbjct: 17 TPAPPRPHHLPPAPPSPA 34
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 147 LKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYED 263
LK + V+ TSK G+ GH KV V ++ KK D
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAAD 717
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 117 SALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 236
SA+ ++ F + + K+VEM ++ K + KVH G D
Sbjct: 554 SAIVRHMFTLYDFKLAKLVEMESALEDKSKNVKVHAEGYD 593
>07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 92 PHHLPHAMFGPA*KRFRYAEGSSMQDC*NVHIQ 190
P LPH +FG + RY+ ++D NV+ Q
Sbjct: 998 PSLLPHEIFGGVPSKDRYSHPQKLEDKVNVNTQ 1030
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 97 PPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPE 198
PP PC PC K C + C PKP+
Sbjct: 85 PPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKPK 117
>09_06_0072 - 20682424-20682870,20683928-20684854
Length = 457
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 40 TTMGDIEDTHFDTGDSGASPPSP 108
+T D +D+ FD DS SPPSP
Sbjct: 12 STSLDSDDSFFDALDSLPSPPSP 34
>07_01_0517 - 3854875-3855120,3855944-3856144
Length = 148
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 92 PHHLPHAMFGPA*KRF 139
PHHLPH PA K F
Sbjct: 50 PHHLPHRPMTPACKNF 65
>01_06_0675 +
31092877-31092916,31093349-31093503,31093570-31093677,
31094283-31094487,31094858-31094955,31095052-31095135,
31095227-31095304,31095462-31095554,31095646-31095675,
31095932-31096273,31096353-31096434,31096527-31096622,
31096728-31096907,31097002-31097108,31097207-31097308,
31097611-31097666,31097749-31098002,31098077-31098240,
31098564-31098747,31098825-31098969,31099561-31099661,
31099803-31099870
Length = 923
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 117 SALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNG 248
S RKN F R ++ + H VH+ G+D+ NG
Sbjct: 590 SLSRKNAFSYESNRAVGSTALNERSSRSHSILTVHVRGLDVKNG 633
>06_03_0704 + 23706318-23707024,23707093-23707222
Length = 278
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 7 HIIPDRC*IQNTTMGDIEDTHFDTGDSGASPPSP 108
H PD C + + G + D D D G P P
Sbjct: 230 HAAPDDCYVLGSYAGFLWDAEEDDDDHGGEQPPP 263
>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
Length = 877
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 105 PMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGH 209
P+QC AL V L P S+ G HGH
Sbjct: 63 PLQCKALELCFNVALNRLPASAAVASSPLLGGHGH 97
>01_03_0056 +
12089404-12090300,12090429-12090581,12090999-12091157,
12091575-12091734,12092185-12092201,12092682-12092798,
12092914-12093303
Length = 630
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -3
Query: 263 IFILFTIEDINPNQVNFSVAVLSGFG-CGHFNNLAWTTLQHNETVFTQGRTLHGEGGEAP 87
+F+ IE V F+ VL+ G LAW TLQ + GR +G +
Sbjct: 198 LFVKLRIEQCVNRVVFFAKFVLAKLRFAGLGAGLAWGTLQESARRVVYGRPADADGKRSA 257
Query: 86 ESP 78
SP
Sbjct: 258 MSP 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,151,377
Number of Sequences: 37544
Number of extensions: 188604
Number of successful extensions: 550
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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