Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31975
         (304 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   134   2e-32
AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   134   2e-32
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   134   2e-32
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   134   2e-32
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   134   2e-32
AE014134-1066|AAF52356.2|  808|Drosophila melanogaster CG31640-P...    28   2.6  
M21070-1|AAA28409.1|  472|Drosophila melanogaster protein ( D.me...    26   8.0  

>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  134 bits (324), Expect = 2e-32
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 102 FPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTH 281
           +PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED  PSTH
Sbjct: 19  YPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTH 78

Query: 282 NMDVPHV 302
           NMDVP+V
Sbjct: 79  NMDVPNV 85


>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  134 bits (324), Expect = 2e-32
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 102 FPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTH 281
           +PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED  PSTH
Sbjct: 19  YPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTH 78

Query: 282 NMDVPHV 302
           NMDVP+V
Sbjct: 79  NMDVPNV 85


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  134 bits (324), Expect = 2e-32
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 102 FPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTH 281
           +PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED  PSTH
Sbjct: 19  YPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTH 78

Query: 282 NMDVPHV 302
           NMDVP+V
Sbjct: 79  NMDVPNV 85


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  134 bits (324), Expect = 2e-32
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 102 FPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTH 281
           +PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED  PSTH
Sbjct: 19  YPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTH 78

Query: 282 NMDVPHV 302
           NMDVP+V
Sbjct: 79  NMDVPNV 85


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  134 bits (324), Expect = 2e-32
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +3

Query: 102 FPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTH 281
           +PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED  PSTH
Sbjct: 19  YPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTH 78

Query: 282 NMDVPHV 302
           NMDVP+V
Sbjct: 79  NMDVPNV 85


>AE014134-1066|AAF52356.2|  808|Drosophila melanogaster CG31640-PA
           protein.
          Length = 808

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -3

Query: 254 LFTIEDINPNQVNFSVAVLSGFGCGHFNNLAWTTLQHNETVFTQGRTL 111
           L+T     P  ++   +   G+GCG  +   ++   HN  + T G+ L
Sbjct: 665 LYTTMPKKPQHLSLVASTAGGYGCGTSSKPKYSLTLHNSKLATGGKHL 712


>M21070-1|AAA28409.1|  472|Drosophila melanogaster protein (
           D.melanogaster caudalgene (cad) encoding a maternal and
           zygotic transcript,exon 2. ).
          Length = 472

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 183 TSKTGKHGHAKVHLVGIDIFNGKKYEDXXPSTHN 284
           TS +  H H   HL  +   N     +  PSTHN
Sbjct: 168 TSASSPHHHLAHHLSAVANNNNNNNNNNSPSTHN 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,169,360
Number of Sequences: 53049
Number of extensions: 309780
Number of successful extensions: 846
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)