Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31974
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1557 - 38231826-38233391                                         33   0.31 
03_06_0474 - 34184002-34184660,34184755-34184887,34185071-341858...    32   0.41 
02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772...    32   0.41 
04_04_0354 - 24630813-24630938,24631090-24631143,24631235-246313...    29   5.1  
01_05_0333 + 21064693-21066006                                         29   5.1  
03_01_0136 + 1069136-1069292,1070783-1071060,1071246-1071602,107...    28   8.9  

>01_06_1557 - 38231826-38233391
          Length = 521

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 698 IAHAQR*RNV*ERSAGCRPVGTVRTKSVAVGQRFRRAQASAV 573
           ++ AQ  +++ +R  GCRP G  RT  V      R  + SAV
Sbjct: 216 VSKAQHLKHILQRFIGCRPTGKARTNKVVAAALHRLVKESAV 257


>03_06_0474 -
           34184002-34184660,34184755-34184887,34185071-34185886,
           34186013-34186104,34186710-34186863
          Length = 617

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -3

Query: 688 HNVNAMFENVLRDVDQWARYVRSL-WQWVNGSAGRKPRPCLAQHPYVKTADRADKAW 521
           ++V    E     V +W+R  R L +  VN        PCL  HP+VK+A +    W
Sbjct: 493 YDVFEKLEKKYMKVAEWSRSDRKLIFDMVNTILSEILAPCLDMHPWVKSARKMAPVW 549


>02_05_0136 +
           26174965-26175849,26176965-26177030,26177124-26177258,
           26177369-26177434,26177516-26177701,26177777-26177863,
           26177985-26178098,26178174-26178298,26178375-26178483,
           26179298-26179423,26179511-26179831,26180146-26180269,
           26180405-26180529
          Length = 822

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +2

Query: 524 GLIRAVRGLYVRVLRQTRPRLAPCGTVDPLPQTSYVPCPLVDIPQNVLKHCVNVV 688
           G +    G  +  LR  RP +A  G+ +P PQT+YV  P  D   ++ K+ V  V
Sbjct: 161 GFLLLQLGFAIFALRMLRPEIALPGS-EPRPQTTYVSVPYSDFLASIDKNQVKKV 214


>04_04_0354 -
           24630813-24630938,24631090-24631143,24631235-24631300,
           24631423-24631488,24631593-24631751
          Length = 156

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 442 GQDGPITCKEKDSGFV*ALYEAVATFTRPYPRGPRSLRKGVAPDTAEACALRNR 603
           G+    +  ++ SG++  L++ +   + PY R P     G AP+  +  +LRNR
Sbjct: 74  GKTDTASVLQEASGYIKFLHQQLEVLSSPYMRAPPV--PGAAPEDPDHYSLRNR 125


>01_05_0333 + 21064693-21066006
          Length = 437

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +1

Query: 508 VATFTRPYPRGPRSLRKGVAPDTAEACALRNR*PTATDFVRTVPTGRHPAER 663
           V T   P P  P  L  G+A D    CAL +  P+  D V   P   H   R
Sbjct: 74  VPTTALPIPPPPPELHCGMALDCRHGCALLDAYPSRIDLVVWHPMTGHLLRR 125


>03_01_0136 +
           1069136-1069292,1070783-1071060,1071246-1071602,
           1071706-1072119,1072221-1072302,1072429-1073093
          Length = 650

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 119 VCASEFCREEQVKVSVLCNRLQHALTVESLRFQ-FP 15
           V A+  C   +V V++ C RLQH LT+  L  + FP
Sbjct: 254 VSANFSCLPSKVDVALECARLQHRLTLPPLEVEDFP 289


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,430,396
Number of Sequences: 37544
Number of extensions: 394065
Number of successful extensions: 991
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)