Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31974
(738 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 25 0.98
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 23 3.0
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 4.0
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 4.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 4.0
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.2
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 5.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 6.9
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.6 bits (51), Expect = 0.98
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 87 GQGLCVVQSLAARTDRRISPFSVPTGTV 4
G+ C++QS AA T + ++ TV
Sbjct: 123 GEAFCIIQSFAAETSANATVLTITAFTV 150
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 188 IQIRRRTLYYFFNLIVP 204
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 188 IQIRRRTLYYFFNLIVP 204
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 188 IQIRRRTLYYFFNLIVP 204
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 188 IQIRRRTLYYFFNLIVP 204
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 188 IQIRRRTLYYFFNLIVP 204
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 188 IQIRRRTLYYFFNLIVP 204
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 256 IQIRRRTLYYFFNLIVP 272
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 256 IQIRRRTLYYFFNLIVP 272
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 23.0 bits (47), Expect = 3.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 320 RYLIIH*SFHCRVTLTIKLKKRYSNQN*PYNS*KKFKWSYSCFLGTC 180
RY IIH + IK+++ ++ + KK+ +YSCF+ TC
Sbjct: 38 RYCIIHMGLTFKDF--IKMQELLQEEDISEGNIKKYLTNYSCFI-TC 81
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 480 AIFFLASYWTVLSLTTFYVCRGIL 409
A+ FLA Y+ + S F+ RG++
Sbjct: 12 AVLFLALYYYLTSTFDFWKSRGVV 35
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 631 YVRSLWQWVNGSAGRK 584
YV SLW W++ ++ K
Sbjct: 277 YVMSLWYWIDRNSAYK 292
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 693 PCTTLTQCLRTFCGMSTSGHGTYEVCGSGS 604
P + + +C+ G SG G+ E SGS
Sbjct: 584 PNSAVRKCMSPINGSGASGSGSAENLSSGS 613
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 640 WARYVRSLWQWVNGSAG 590
W + V +L +W NG G
Sbjct: 337 WDKNVEALAKWANGQTG 353
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 696 CPCTTLTQCLRT 661
C TTLT CLR+
Sbjct: 166 CALTTLTDCLRS 177
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 6.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 110 LRTLELYYFFSISIP 154
+R LYYFF++ +P
Sbjct: 227 IRRRTLYYFFNLIVP 241
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,984
Number of Sequences: 438
Number of extensions: 4239
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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