Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31972
(530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 138 3e-33
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 134 4e-32
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 134 6e-32
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 131 4e-31
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 54 5e-08
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 32 0.25
02_05_0250 + 27153048-27154453,27154546-27154885 31 0.44
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 0.76
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 1.8
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 29 1.8
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 2.3
11_06_0437 - 23533218-23536382 29 3.1
05_01_0297 - 2314687-2316021 29 3.1
07_01_0200 + 1433859-1434377 28 4.1
07_01_0196 + 1400708-1401226 28 4.1
07_01_0192 + 1367558-1368076 28 4.1
07_01_0188 + 1334405-1334923 28 4.1
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 28 4.1
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 28 5.4
11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617 27 7.1
10_01_0357 - 3928646-3928954 27 7.1
09_06_0233 - 21740974-21741159,21741263-21741455,21741552-217417... 27 7.1
07_01_0204 + 1476517-1477047 27 7.1
07_01_0202 + 1464905-1465423 27 7.1
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 27 7.1
02_05_0664 + 30717551-30719491 27 7.1
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 27 9.4
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 27 9.4
01_06_1303 - 36132588-36132710,36133879-36134103,36134318-361347... 27 9.4
01_06_0102 - 26447286-26448107,26448248-26448385,26448990-264493... 27 9.4
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 138 bits (333), Expect = 3e-33
Identities = 64/130 (49%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
Frame = +1
Query: 37 RPCVKTVSLC*RVVHARLLKCPHPKPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVP 216
RPC + + +V ++++ K GKHGHAK H V IDIFNGKK EDI PS+HN DVP
Sbjct: 1361 RPCKWSGNHASLLVDTKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVP 1420
Query: 217 HVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKS 393
HV R DYQL DIS+DG+++L+ ++G ++DL++P D L TQ++ F GK+L+ TV+ +
Sbjct: 1421 HVNRTDYQLIDISEDGFVSLLTESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSA 1480
Query: 394 CGEECVIAVK 423
GEE + A+K
Sbjct: 1481 MGEEQICALK 1490
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 13/52 (25%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPC-------------KIVEMSTSKTGK 119
+GAS T+P Q +RKNG +++K RPC K+VE+STSKTGK
Sbjct: 1337 AGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVSTSKTGK 1388
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 134 bits (324), Expect = 4e-32
Identities = 60/107 (56%), Positives = 82/107 (76%), Gaps = 2/107 (1%)
Frame = +1
Query: 109 KPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADN 288
K GKHGHAK H VGIDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++
Sbjct: 50 KTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTES 109
Query: 289 GDLREDLKIP-DGDLGTQLRTDF-DSGKELLCTVLKSCGEECVIAVK 423
G+ ++DL++P D L Q++ F + GK+++ TV+ + GEE + AVK
Sbjct: 110 GNTKDDLRLPTDDTLTNQIKNGFGEEGKDMILTVMSAMGEEQICAVK 156
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/39 (61%), Positives = 33/39 (84%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK 119
+GAS T+P Q +RKNG++++K RPCK+VE+STSKTGK
Sbjct: 15 AGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGK 53
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 134 bits (323), Expect = 6e-32
Identities = 59/106 (55%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +1
Query: 109 KPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADN 288
K GKHGHAK H V IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++
Sbjct: 67 KTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTES 126
Query: 289 GDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 423
G+ ++DL++P D L Q++T F GK+L+ TV+ + GEE + A+K
Sbjct: 127 GNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172
Score = 55.6 bits (128), Expect = 2e-08
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 4/43 (9%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPC----KIVEMSTSKTGK 119
+GAS T+P Q +RKNG++++K RPC K+VE+STSKTGK
Sbjct: 28 AGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGK 70
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 131 bits (316), Expect = 4e-31
Identities = 58/121 (47%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Frame = +1
Query: 64 C*RVVHARLLKCPHPKPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQL 243
C + ++++ K GKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL
Sbjct: 67 CYELYSDKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQL 126
Query: 244 TDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAV 420
DIS+DG+++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + A+
Sbjct: 127 IDISEDGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICAL 186
Query: 421 K 423
K
Sbjct: 187 K 187
Score = 43.6 bits (98), Expect = 1e-04
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPCK 86
+GAS T+P Q +RKNG++++K RPCK
Sbjct: 15 AGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +1
Query: 217 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 390
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 391 SCG 399
+ G
Sbjct: 106 AMG 108
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 4 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKP 114
P PQPP PC PC K C + C PKP
Sbjct: 81 PLPQPPPPCKPPPCEKPPEDC-KPKPCHCCSCEKPKP 116
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 280 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 435
A GD DL IPD + TQ+ T+ S C V S G C AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 208 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 327
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>12_01_1024 -
10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +1
Query: 286 NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTAVD 441
N D D I G GTQ D +L +VLKS + CV A KA+ D
Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKASMDPD 781
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = -3
Query: 405 LLTAGFQHGAQQFLAAVEVSTQLCAEVTIRDFEVLTQVTIVSHQGQVAIIRDISQLVVFA 226
++ AG H ++ FLA ++ T + +E +++ VL+ +T ++ V D L V
Sbjct: 1035 MVEAGTHHTSKPFLAPLKELT-IYSESSVQSMAVLSSLTSLTRLRLV----DCDNLTV-- 1087
Query: 225 LHVGYVHVVCGGTDIFILFTIEDINPNQVNFSVA 124
VG+ V+ G +++ DI+ N SVA
Sbjct: 1088 --VGFDPVMTGSLSELVIYNKPDIDDNNHRCSVA 1119
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 316 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 402
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 127 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 264
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>05_01_0297 - 2314687-2316021
Length = 444
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 241 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 399
+ D + +G L + AD D+R + DGD G +LR F S +LL V S G
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142
>07_01_0200 + 1433859-1434377
Length = 172
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 452 LVYLSTAVFALTAMT---HSSPQDFSTVHNNS 366
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0196 + 1400708-1401226
Length = 172
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 452 LVYLSTAVFALTAMT---HSSPQDFSTVHNNS 366
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0192 + 1367558-1368076
Length = 172
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 452 LVYLSTAVFALTAMT---HSSPQDFSTVHNNS 366
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0188 + 1334405-1334923
Length = 172
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 452 LVYLSTAVFALTAMT---HSSPQDFSTVHNNS 366
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 95 FNNLAWTTLQHNETVFTQGRTLHGEGG 15
+N+ AW + ++ +F G +HG GG
Sbjct: 167 YNSAAWASFSSHQPIFLPGHGVHGCGG 193
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +1
Query: 181 DICPSTHNMD---VPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 351
D CP T D V++ + TD +M G + GDLG+ RTD
Sbjct: 233 DQCPGTSATDSTGATCVQQAEKVSTDSDQVAKAAMMTAEGAMNFMRSTISGDLGSFPRTD 292
Query: 352 FDSGKE 369
SGKE
Sbjct: 293 AASGKE 298
>11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617
Length = 772
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +1
Query: 4 PGPQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPGKHGHAKVHLVGIDIFNGKKY 177
P P PPSP ++ C + A HG +VH+V +DI G ++
Sbjct: 474 PYPFPPSPETLKVYQILYQACPYIKFAHFTANQAIFEAFHGEDRVHVVDLDILQGYQW 531
>10_01_0357 - 3928646-3928954
Length = 102
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 278 WLTMVTCVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSP 418
W ++ + V SA T+ A C PC NP RS P
Sbjct: 3 WAAAAAATASAAATAVASA----ATAAATERCVTPCSNPTARSIPRP 45
>09_06_0233 -
21740974-21741159,21741263-21741455,21741552-21741787,
21742207-21742367,21742462-21742512,21743279-21743648
Length = 398
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 10 PQPPSPCNVRPCVKTVSLC*RVVHARLLKCPHPKPGKHGHAKV 138
P PP PC+VR C V P P P GH V
Sbjct: 3 PPPPPPCSVRAAGSNPIGCLEVAEPWSGAAPPPLPPLPGHLHV 45
>07_01_0204 + 1476517-1477047
Length = 176
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 452 LVYLSTAVFALTAMT---HSSPQDFSTVHN 372
LV L+ A A+ A T SSPQDF HN
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFLDAHN 37
>07_01_0202 + 1464905-1465423
Length = 172
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 452 LVYLSTAVFAL---TAMTHSSPQDFSTVHN 372
LV L+ A A+ TA SSPQDF HN
Sbjct: 9 LVLLAAATLAMEAGTAAAQSSPQDFLDAHN 38
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 178 EDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRED--LKIPDGDLGTQLRTD 351
E+I P+ + MD+ + E Y + I+++ + GD+ + L +P+ +L +
Sbjct: 571 EEIPPNANGMDIDSDREETYNVEGIAENSEDCRVRGGGDIDTECNLSLPEHELPLHQESK 630
Query: 352 FDS 360
DS
Sbjct: 631 SDS 633
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 121 HGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 222
HG+ L+ D+ G D+ HNM++ H+
Sbjct: 385 HGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 250 ISDDGYLTLMADNGDLREDLKIP 318
+ DDG + M NGD RE LK P
Sbjct: 92 VKDDGVINSMTRNGDRRELLKGP 114
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 283 QPSGSGSHHPRYQSVGSLRASRGVRPCCVWR 191
+PSG+ + P Q +L +RG R C VWR
Sbjct: 22 RPSGTANQSPNSQIGQTL--TRGPRTCAVWR 50
>01_06_1303 -
36132588-36132710,36133879-36134103,36134318-36134713,
36135352-36135547,36135591-36135740,36135818-36135924,
36135987-36136094,36136354-36136435,36136436-36136536,
36136778-36136996,36137455-36137583,36137665-36137742,
36137816-36137929,36138071-36138230,36139224-36139441
Length = 801
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 12 SATFPMQCSALRKNGFVMLKGRPCKIVEMS 101
+ATFPM L N + +GR CK V +S
Sbjct: 452 TATFPMFPERLAMNAMSLQQGRGCKSVTVS 481
>01_06_0102 -
26447286-26448107,26448248-26448385,26448990-26449359,
26449505-26449606,26449696-26449788,26449934-26450181,
26451088-26451274,26451825-26452043,26452464-26452660,
26453545-26453875,26454099-26454457,26455141-26455240,
26455349-26455464,26455547-26455663,26455782-26455880,
26456057-26456131,26456205-26456286,26457724-26457763,
26458685-26458769,26458924-26459055
Length = 1303
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 249 ISQLVVFALHVGYVHVVCGGTD-IFILFTIEDINPNQ 142
IS L+ F G VH+V GG+D + IL++ + I+ ++
Sbjct: 126 ISCLMTFMSAAGEVHLVSGGSDGLLILWSADHIHDSR 162
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,424,771
Number of Sequences: 37544
Number of extensions: 349539
Number of successful extensions: 1082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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