Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31972
(530 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 204 4e-53
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 203 1e-52
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 203 1e-52
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 203 1e-52
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 203 1e-52
AE014298-591|AAF45913.2| 942|Drosophila melanogaster CG32778-PA... 30 1.7
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 28 9.1
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 28 9.1
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 28 9.1
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 28 9.1
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 28 9.1
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 28 9.1
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 28 9.1
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 204 bits (499), Expect = 4e-53
Identities = 90/120 (75%), Positives = 106/120 (88%)
Frame = +1
Query: 85 RLLKCPHPKPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 264
++++ K GKHGHAKVH+VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL ISDD
Sbjct: 40 KIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDS 99
Query: 265 YLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTAVDK 444
+LTLM D+GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTA+DK
Sbjct: 100 FLTLMTDSGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK 119
SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGK
Sbjct: 13 SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGK 51
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 203 bits (495), Expect = 1e-52
Identities = 89/120 (74%), Positives = 106/120 (88%)
Frame = +1
Query: 85 RLLKCPHPKPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 264
++++ K GKHGHAKVH+VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL ISDD
Sbjct: 40 KIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDS 99
Query: 265 YLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTAVDK 444
+LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTA+DK
Sbjct: 100 FLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK 119
SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGK
Sbjct: 13 SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGK 51
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 203 bits (495), Expect = 1e-52
Identities = 89/120 (74%), Positives = 106/120 (88%)
Frame = +1
Query: 85 RLLKCPHPKPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 264
++++ K GKHGHAKVH+VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL ISDD
Sbjct: 40 KIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDS 99
Query: 265 YLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTAVDK 444
+LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTA+DK
Sbjct: 100 FLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK 119
SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGK
Sbjct: 13 SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGK 51
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 203 bits (495), Expect = 1e-52
Identities = 89/120 (74%), Positives = 106/120 (88%)
Frame = +1
Query: 85 RLLKCPHPKPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 264
++++ K GKHGHAKVH+VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL ISDD
Sbjct: 40 KIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDS 99
Query: 265 YLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTAVDK 444
+LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTA+DK
Sbjct: 100 FLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK 119
SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGK
Sbjct: 13 SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGK 51
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 203 bits (495), Expect = 1e-52
Identities = 89/120 (74%), Positives = 106/120 (88%)
Frame = +1
Query: 85 RLLKCPHPKPGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 264
++++ K GKHGHAKVH+VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL ISDD
Sbjct: 40 KIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDS 99
Query: 265 YLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTAVDK 444
+LTLM ++GDLREDLK+P+G+LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTA+DK
Sbjct: 100 FLTLMTESGDLREDLKVPEGELGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +3
Query: 3 SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGK 119
SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGK
Sbjct: 13 SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGK 51
>AE014298-591|AAF45913.2| 942|Drosophila melanogaster CG32778-PA
protein.
Length = 942
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 43 CVKTVSLC*RVVHARLLKCPHPKPGKHGHAKVH 141
C++T+++ +H ++LKCP P GH + H
Sbjct: 28 CIRTIAVL--ALHEQILKCPTPGCNGRGHVQPH 58
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 401 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 294
+P+D VHN + L++ V C G++ +R
Sbjct: 564 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 599
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 401 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 294
+P+D VHN + L++ V C G++ +R
Sbjct: 1042 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1077
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 401 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 294
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 401 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 294
+P+D VHN + L++ V C G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 401 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 294
+P+D VHN + L++ V C G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 401 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 294
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 401 SPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 294
+P+D VHN + L++ V C G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,570,404
Number of Sequences: 53049
Number of extensions: 588057
Number of successful extensions: 1671
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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