Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV31971
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 98 2e-21
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 54 3e-08
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 54 3e-08
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 27 4.4
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 27 4.4
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 26 5.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 26 5.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 26 5.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 26 5.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 26 5.8
U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2 ... 26 7.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 26 7.7
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 97.9 bits (233), Expect = 2e-21
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = +3
Query: 186 IEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEIRALKDAHAQFQ 332
IEELYL FAKKAS FNSWFENAEEDLTDPVRCNS+EEIRAL+DAH +FQ
Sbjct: 2049 IEELYLAFAKKASTFNSWFENAEEDLTDPVRCNSLEEIRALRDAHGEFQ 2097
Score = 67.7 bits (158), Expect = 2e-12
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +2
Query: 2 FEHEGIQNITSLKEQLVAAGHEQTPAIVKRHGDVIARWQRLLSDS 136
FEHEGIQ IT LK+QLV++ H+Q+PAI KRH +VI RWQ LL+ S
Sbjct: 1988 FEHEGIQRITELKDQLVSSEHQQSPAIEKRHTNVIQRWQNLLAHS 2032
Score = 29.1 bits (62), Expect = 0.83
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = +2
Query: 5 EHEGIQNITSLKEQLVAAGHEQTPAIVKRHGDVIARWQRL 124
+ E I+ + E L+ H +PA+ ++ ++ RW L
Sbjct: 1454 QEEKIKGLKLFAESLIKNNHYDSPAVTRKRDQILDRWNGL 1493
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 17 IQNITSLKEQLVAAGHEQTPAIVKRHGDVIARWQRL 124
I I ++LV GH + I K+ DV W RL
Sbjct: 222 INEINQAADKLVEEGHSEHDQIYKKRDDVNDAWHRL 257
Score = 26.2 bits (55), Expect = 5.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 189 EELYLTFAKKASAFNSWFENAEEDLTD 269
++L FAK A+AF++W N +++ +
Sbjct: 2164 DKLRREFAKLANAFHAWLTNTRQEMME 2190
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 53.6 bits (123), Expect = 3e-08
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +3
Query: 186 IEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEIRALKDAHAQFQA 335
++ LYL FAK+A+ FN+W + A EDL D V + + EI L +AH QF++
Sbjct: 512 LDSLYLDFAKRAAPFNNWLDGAREDLADLVIVHEMREIEELVNAHDQFKS 561
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 53.6 bits (123), Expect = 3e-08
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +3
Query: 186 IEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEEIRALKDAHAQFQA 335
++ LYL FAK+A+ FN+W + A EDL D V + + EI L +AH QF++
Sbjct: 538 LDSLYLDFAKRAAPFNNWLDGAREDLADLVIVHEMREIEELVNAHDQFKS 587
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +3
Query: 117 SDCSPTPPPGKXXXXXXXXXXXXIEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEE 296
S SP PPPG E+L + FAKK A + + + L + ++ E
Sbjct: 6 SSISPVPPPGSSSGGGKKLDSLPKEDL-VKFAKKQVAHVAEMKKNQTALMEKLKAKMSEL 64
Query: 297 IRALKDA 317
+ KDA
Sbjct: 65 EQVKKDA 71
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +3
Query: 117 SDCSPTPPPGKXXXXXXXXXXXXIEELYLTFAKKASAFNSWFENAEEDLTDPVRCNSIEE 296
S SP PPPG E+L + FAKK A + + + L + ++ E
Sbjct: 6 SSISPVPPPGSSSGGGKKLDSLPKEDL-VKFAKKQVAHVAEMKKNQTALMEKLKAKMSEL 64
Query: 297 IRALKDA 317
+ KDA
Sbjct: 65 EQVKKDA 71
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 66 SCPAATSCSFRDVMFW 19
SCP A CS RD FW
Sbjct: 123 SCPRAGICSPRDTFFW 138
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 26.2 bits (55), Expect = 5.8
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 186 IEELYLTFAKKASAFNSWFENAEEDLTDPV 275
++ + +++ A +W E AEED++D V
Sbjct: 1746 VQNIQDEYSRTACELGNWLEQAEEDVSDVV 1775
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 319 CASLSARISSMELQRTGSVRSSSAFSNHELNAE 221
CA+ S SS+ + TG SSS S H L E
Sbjct: 666 CATSSGSTSSITITTTGCSTSSSGPSKHILGGE 698
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 319 CASLSARISSMELQRTGSVRSSSAFSNHELNAE 221
CA+ S SS+ + TG SSS S H L E
Sbjct: 667 CATSSGSTSSITITTTGCSTSSSGPSKHILGGE 699
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 319 CASLSARISSMELQRTGSVRSSSAFSNHELNAE 221
CA+ S SS+ + TG SSS S H L E
Sbjct: 667 CATSSGSTSSITITTTGCSTSSSGPSKHILGGE 699
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 319 CASLSARISSMELQRTGSVRSSSAFSNHELNAE 221
CA+ S SS+ + TG SSS S H L E
Sbjct: 667 CATSSGSTSSITITTTGCSTSSSGPSKHILGGE 699
>U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2
protein.
Length = 508
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 102 TSPCRFTMAGVCSCPAATSCS 40
T PC TMAG+ C TSCS
Sbjct: 239 TLPCNCTMAGITPC--HTSCS 257
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 5 EHEGIQNITSLKEQLVAAGHEQTPAIVKRHGDVI 106
EH+ +Q I + E V + PA+V+ V+
Sbjct: 213 EHQAVQEIVAETEAPVVVAETEAPAVVETEAPVV 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.128 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,895,245
Number of Sequences: 27780
Number of extensions: 97697
Number of successful extensions: 331
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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