Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31971
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   0.57 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   1.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   1.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   3.0  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          20   9.2  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 243 ENAEEDLTDPVRCN 284
           +NAEED+ DPV  N
Sbjct: 161 QNAEEDIVDPVEEN 174


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 322 ACASLSARISSMELQRTGSVRSSSAFSNHE 233
           A +S S R  S   QRT S  S    S HE
Sbjct: 211 AISSNSLRSRSRSFQRTSSCHSRYEDSRHE 240


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 322 ACASLSARISSMELQRTGSVRSSSAFSNHE 233
           A +S S R  S   QRT S  S    S HE
Sbjct: 211 AISSNSLRSRSRSFQRTSSCHSRYEDSRHE 240


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 322 ACASLSARISSMELQRTGSVRSSSAFSNHE 233
           A +S S R  S   QRT S  S    S HE
Sbjct: 211 AISSNSLRSRSRSFQRTSSCHSRYEDSRHE 240


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 322 ACASLSARISSMELQRTGSVRSSSAFSNHE 233
           A +S S R  S   QRT S  S    S HE
Sbjct: 211 AISSNSLRSRSRSFQRTSSCHSRYEDSRHE 240


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 322 ACASLSARISSMELQRTGSVRSSSAFSNHE 233
           A +S S R  S   QRT S  S    S HE
Sbjct: 211 AISSNSLRSRSRSFQRTSSCHSRYEDSRHE 240


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 322 ACASLSARISSMELQRTGSVRSSSAFSNHE 233
           A +S S R  S   QRT S  S    S HE
Sbjct: 211 AISSNSLRSRSRSFQRTSSCHSRYEDSRHE 240


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 287 GVAAHGVRQVLLRVLEPRVECRSLFGEGEVEFLD 186
           G+A  G+  V +R   PR    S+    E ++LD
Sbjct: 12  GIACQGITSVTVRENSPRKLANSMNVIHEWKYLD 45


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -1

Query: 322 ACASLSARISSMELQRTGSVRSSSAFSNHE 233
           A +S S R  S   QRT S  S      HE
Sbjct: 211 AISSNSLRSRSRSFQRTSSCHSRYEDLRHE 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.128    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,444
Number of Sequences: 438
Number of extensions: 1014
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)