Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31968
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical pr...    31   0.89 
Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical pr...    31   0.89 
L13200-5|AAZ32789.1|  148|Caenorhabditis elegans Hypothetical pr...    28   4.8  

>Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical protein
            ZK337.1c protein.
          Length = 1516

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 173  VIIIRESNTH---INIKYMYFLHGYQVSSQSDARFSNYNGTYV 292
            V I+   +TH   INI+    L  YQ+SS +DA   N NGT V
Sbjct: 1282 VTILNGKHTHSFDINIRNAIVLQSYQLSSLNDAVSINANGTGV 1324


>Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical protein
            ZK337.1b protein.
          Length = 1501

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 173  VIIIRESNTH---INIKYMYFLHGYQVSSQSDARFSNYNGTYV 292
            V I+   +TH   INI+    L  YQ+SS +DA   N NGT V
Sbjct: 1285 VTILNGKHTHSFDINIRNAIVLQSYQLSSLNDAVSINANGTGV 1327


>Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical protein
            ZK337.1a protein.
          Length = 1508

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 173  VIIIRESNTH---INIKYMYFLHGYQVSSQSDARFSNYNGTYV 292
            V I+   +TH   INI+    L  YQ+SS +DA   N NGT V
Sbjct: 1274 VTILNGKHTHSFDINIRNAIVLQSYQLSSLNDAVSINANGTGV 1316


>L13200-5|AAZ32789.1|  148|Caenorhabditis elegans Hypothetical
           protein ZK1236.5 protein.
          Length = 148

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 193 GLPNNNDNK**CPRKRGSTANLL*NHTKVDDCLK*LA 83
           G P N +      RK+ +  NLL  HT V+D L  LA
Sbjct: 106 GKPKNTEGSKSTIRKKANVGNLLHTHTTVEDSLAGLA 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,163,900
Number of Sequences: 27780
Number of extensions: 258014
Number of successful extensions: 386
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)