Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV31968
         (628 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.2  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   5.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 601 GGGTYPRGLTRGPTTSNTGNTRY*LLDWKQRLFL 500
           GGGT     T G   + T  T Y  ++ +QR+ L
Sbjct: 286 GGGTTSSRRTTGSRAAATTTTVYQFIEERQRISL 319


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 601 GGGTYPRGLTRGPTTSNTGNTRY*LLDWKQRLFL 500
           GGGT     T G   + T  T Y  ++ +QR+ L
Sbjct: 286 GGGTTSSRRTTGSRAAATTTTVYQFIEERQRISL 319


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 601 GGGTYPRGLTRGPTTSNTGNTRY*LLDWKQRLFL 500
           GGGT     T G   + T  T Y  ++ +QR+ L
Sbjct: 286 GGGTTSSRRTTGSRAAATTTTVYQFIEERQRISL 319


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 143 PPLPWALLFIVIIIRESNTHINIKYMYFLHGYQ 241
           PP P +  F +  +   +T +++K+    HG Q
Sbjct: 302 PPTPGSFNFSMAALATEHTPLSVKFPGMGHGLQ 334


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 167 FIVIIIRESNTHINIKYMYFLHGYQVSSQS 256
           FIV+   ++  +I+ KY    +GY ++S+S
Sbjct: 103 FIVVKNDDNFRNISEKYQEIFNGYFLNSES 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,679
Number of Sequences: 438
Number of extensions: 3433
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)